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Geology topics

Jingping Xu

Publications and source records attributed to Jingping Xu.

At least 19 recordsLinked to original sources

Preconditioning by sediment accumulation can produce powerful turbidity currents without major external triggers

Turbidity currents dominate sediment transfer into the deep ocean, and can damage critical seabed infrastructure. It is commonly inferred that powerful turbidity currents are triggered by major external events, such as storms, river floods, or earthquakes. However, basic models for turbidity current triggering remain poorly tested, with few studies accurately recording precise flow timing. Here, we analyse the most detailed series of measurements yet made of powerful (up to 7.2 m s −1 ) turbidity currents, within Monterey Canyon, offshore California. During 18-months of instrument deployment, fourteen turbidity currents were directly monitored. No consistent triggering mechanism was observed, though flows did cluster around enhanced seasonal sediment supply. We compare turbidity current timing at Monterey Canyon (a sandy canyon-head fed by longshore drift) to the only other systems where numerous (>10-100) flows have been measured precisely via direct monitoring; the Squamish Delta (a sandy fjord-head delta), and the Congo Canyon (connected to the mud-dominated mouth of the Congo River). A common seasonal pattern emerges, leading to a new model for preconditioning and triggering of turbidity currents initiating through slope failure in areas of sediment accumulation, such as canyon heads or river mouths. In this model, rapid or sustained sediment supply alone can produce elevated pore pressures, which may persist, thereby predisposing slopes to fail. Once preconditioned, a range of minor external perturbations, such as moderate storm-waves, result in local pore pressure variation, and thus become effective triggers. Major external triggers are therefore not always a prerequisite for triggering of powerful turbidity currents.

Earth and Planetary Science Letters

Lessons learned from monitoring of turbidity currents and guidance for future platform designs

Turbidity currents transport globally significant volumes of sediment and organic carbon into the deep-sea and pose a hazard to critical infrastructure. Despite advances in technology, their powerful nature often damages expensive instruments placed in their path. These challenges mean that turbidity currents have only been measured in a few locations worldwide, in relatively shallow water depths (<<2 km). Here, we share lessons from recent field deployments about how to design the platforms on which instruments are deployed. First, we show how monitoring platforms have been affected by turbidity currents including instability, displacement, tumbling and damage. Second, we relate these issues to specifics of the platform design, such as exposure of large surface area instruments within a flow and inadequate anchoring or seafloor support. Third, we provide recommended improvements to improve design by simplifying mooring configurations, minimising surface area, and enhancing seafloor stability. Finally we highlight novel multi-point moorings that avoid interaction between the instruments and the flow, and flow-resilient seafloor platforms with innovative engineering design features, such as ejectable feet and ballast. Our experience will provide guidance for future deployments, so that more detailed insights can be provided into turbidity current behaviour, and in a wider range of settings.

Special Publications

Linking direct measurements of turbidity currents to submarine canyon-floor deposits

Submarine canyons are conduits for episodic and powerful sediment density flows (commonly called turbidity currents) that move globally significant amounts of terrestrial sediment and organic carbon into the deep sea, forming some of the largest sedimentary deposits on Earth. The only record available for most turbidity currents is the deposit they leave behind. Therefore, to understand turbidity current processes, we need to determine the degree to which these flows are represented by their deposits. However, linking flows and deposits is a major long-standing scientific challenge. There are few detailed measurements from submarine turbidity currents in action, and even fewer direct measurements that can be compared to resulting seabed deposits. Recently, an extensive array of moorings along Monterey Canyon, offshore California, took measurements and samples during sediment density flow events, providing the most comprehensive dataset to date of turbidity current flows and their deposits. Here, we use sediment trap samples, velocity measurements, and seafloor cores to document how sand is transported through a submarine canyon, and how the transported sediment is represented in seafloor deposits. Sediment trap samples from events contain primarily fine to medium-grained sand with sharp bases, normal grading, and muddy tops. Sediment captured from the water column during the flow shows normal grading, which is broadly consistent with the initial peak and waning of flow velocities measured at a single height within the flow, and may be enhanced by collapsing flows. Flow events contain coarser sand concentrated toward the seafloor and larger grain sizes on the seafloor or in the dense near-bed layer, possibly representative of stratified flows. Although flow velocity varies, sand grain sizes in sediment traps are similar over distances of 50 km down-canyon, suggesting that grain size is an unfaithful record of down-canyon changes in maximum flow speeds. Sand transported within flow events and sampled in sediment traps is similar to sand sampled from the seafloor shortly after the events, but traps do not contain pebbles and gravel common in seabed deposits. Seabed deposits thus appear to faithfully record the sand component that is transported in the water column during sub-annual turbidity currents.

California

Sediment and organic carbon transport and deposition driven by internal tides along Monterey Canyon, offshore California

Submarine canyons provide globally important conduits for sediment and organic carbon transport into the deep-sea. Using a novel dataset from Monterey Canyon, offshore central California, that includes an extensive array of water column sampling devices, we address how fine-grained sediment and organic carbon are transported, mixed, fractionated, and buried along a submarine canyon. Anderson-type sediment traps were deployed 10 to 300 meters above the seafloor on moorings anchored between 278–1849 m water depths along the axial channel of Monterey Canyon during three consecutive 6-month deployments (2015–2017). Tidal currents within the canyon suspended and transported fine-grained sediment and organic carbon that were captured in sediment traps, which show apparent patterns and composition of sediment and organic carbon transport along the canyon. High sediment accumulation rates in traps increased up-canyon and near the seafloor with fine-scale (<1 cm) layering that was increasingly distinctive in CT scans. There was no along-canyon trend in the organic carbon composition (percent modern carbon and isotopic signatures) among trap locations, suggesting mixing. Organic carbon content (weight percent total organic carbon) and excess 210Pb activities (dpm/g) increased down-canyon, reflecting reduced flux of sediment and organic carbon into traps. Differing organic carbon signatures in traps compared with previous measurements of seabed deposits along Monterey Canyon suggest that canyon deposits may not reflect organic carbon available to organisms and transported through the canyon with internal tides. Organic carbon burial efficiency estimates from comparing core and trap samples are low (~26% or much less), suggesting that the modern upper Monterey Canyon may not be an effective sink for carbon in biogeochemical and CO2 cycling. Organic carbon isotopic signatures appear more marine in traps that sample from the water column than in cores that sample seafloor deposits, likely owing to the influence of sediment density flow events on deposits and preferential consumption of relatively fresh marine organic carbon on the seafloor that was largely prevented in preserved traps. Along-canyon sediment and organic carbon transport by internal tides likely occurs in many modern global submarine canyons, but canyon deposits and remaining organic carbon appear to preferentially reflect episodic sediment density flow events unrelated to internal tides. This study provides a quantified example and conceptual schematic for internal-tide-related sediment and organic carbon transport, mixing, and burial trends along a submarine canyon that are likely to have common global aspects.

California

What determines the downstream evolution of turbidity currents?

Seabed sediment flows called turbidity currents form some of the largest sediment accumulations, deepest canyons and longest channel systems on Earth. Only rivers transport comparable sediment volumes over such large areas; but there are far fewer measurements from turbidity currents, ensuring they are much more poorly understood. Turbidity currents differ fundamentally from rivers, as turbidity currents are driven by the sediment that they suspend. Fast turbidity currents can pick up sediment, and self-accelerate (ignite); whilst slow flows deposit sediment and dissipate. Self-acceleration cannot continue indefinitely, and flows might reach a near-uniform state (autosuspension). Here we show how turbidity currents evolve using the first detailed measurements from many locations along their pathway, which come from Monterey Canyon offshore California. All flows initially ignite. Typically, initially-faster flows then achieve near-uniform velocities (autosuspension), whilst slower flows dissipate. Fractional increases in initial velocity favour much longer runout, and a new model explains this bifurcating behaviour. However, the only flow during less-stormy summer months is anomalous as it self-accelerated, which is perhaps due to erosion of surficial-mud layer with fine sands mid-canyon. Turbidity current evolution is therefore highly sensitive to both initial velocities and seabed character.

Earth and Planetary Science Letters

Powerful turbidity currents driven by dense basal layers

Seafloor sediment flows (turbidity currents) are among the volumetrically most important yet least documented sediment transport processes on Earth. A scarcity of direct observations means that basic characteristics, such as whether flows are entirely dilute or driven by a dense basal layer, remain equivocal. Here we present the most detailed direct observations yet from oceanic turbidity currents. These powerful events in Monterey Canyon have frontal speeds of up to 7.2 m s −1 , and carry heavy (800 kg) objects at speeds of ≥4 m s −1 . We infer they consist of fast and dense near-bed layers, caused by remobilization of the seafloor, overlain by dilute clouds that outrun the dense layer. Seabed remobilization probably results from disturbance and liquefaction of loose-packed canyon-floor sand. Surprisingly, not all flows correlate with major perturbations such as storms, floods or earthquakes. We therefore provide a new view of sediment transport through submarine canyons into the deep-sea.

California

A new model for turbidity current behavior based on integration of flow monitoring and precision coring in a submarine canyon

Submarine turbidity currents create some of the largest sediment accumulations on Earth, yet there are few direct measurements of these flows. Instead, most of our understanding of turbidity currents results from analyzing their deposits in the sedimentary record. However, the lack of direct flow measurements means that there is considerable debate regarding how to interpret flow properties from ancient deposits. This novel study combines detailed flow monitoring with unusually precisely located cores at different heights, and multiple locations, within the Monterey submarine canyon, offshore California, USA. Dating demonstrates that the cores include the time interval that flows were monitored in the canyon, albeit individual layers cannot be tied to specific flows. There is good correlation between grain sizes collected by traps within the flow and grain sizes measured in cores from similar heights on the canyon walls. Synthesis of flow and deposit data suggests that turbidity currents sourced from the upper reaches of Monterey Canyon comprise three flow phases. Initially, a thin (38–50 m) powerful flow in the upper canyon can transport, tilt, and break the most proximal moorings and deposit chaotic sands and gravel on the canyon floor. The initially thin flow front then thickens and deposits interbedded sands and silty muds on the canyon walls as much as 62 m above the canyon floor. Finally, the flow thickens along its length, thus lofting silty mud and depositing it at greater altitudes than the previous deposits and in excess of 70 m altitude.

Geology

Sediment concentrations, flow conditions, and downstream evolution of two turbidity currents, Monterey Canyon, USA

The capacity of turbidity currents to carry sand and coarser sediment from shallow to deep regions in the submarine environment has attracted the attention of researchers from different disciplines. Yet not only are field measurements of oceanic turbidity currents a rare achievement, but also the data that have been collected consist mostly of velocity records with very limited or no suspended sediment concentration or grain size distribution data. This work focuses on two turbidity currents measured in Monterey Canyon in 2002 with emphasis on suspended sediment from unique samples collected within the body of these currents. It is shown that concentration and grain size of the suspended material, primarily controlled by the source of the gravity flows and their interaction with bed material, play a significant role in shaping the characteristics of the turbidity currents as they travel down the canyon. Before the flows reach their normal or quasi-steady state, which is defined by bed slope, bed roughness, and suspended grain size, they might pass through a preliminary adjustment stage where they are subject to capacity-driven deposition, and release heavy material in excess. Flows composed of fine (silt/clay) sediments tend to be thicker than those with sands. The measured velocity and concentration data confirm that flow patterns differ between the front and body of turbidity currents and that, even after reaching normal state, the flow regime can be radically disrupted by abrupt changes in canyon morphology.

Deep-Sea Research Part I: Oceanographic Research P

Small-scale turbidity currents in a big submarine canyon

Field measurements of oceanic turbidity currents, especially diluted currents, are extremely rare. We present a dilute turbidity current recorded by instrumented moorings 14.5 km apart at 1300 and 1860 m water depth. The sediment concentration within the flow was 0.017%, accounting for 18 cm/s gravity current speed due to density excess. Tidal currents of &sim;30 cm/s during the event provided a "tailwind" that assisted the down-canyon movement of the turbidity current and its sediment plume. High-resolution velocity measurements suggested that the turbidity current was likely the result of a local canyon wall slumping near the 1300 m mooring. Frequent occurrences, in both space and time, of such weak sediment transport events could be an important mechanism to cascade sediment and other particles, and to help sustain the vibrant ecosystems in deep-sea canyons.

Geology Today

Does littoral sand bypass the head of Mugu Submarine Canyon? - a modeling study

A newly developed sand-tracer code for the process-based model Delft3D (Deltares, The Netherlands) was used to simulate the littoral transport near the head of the Mugu Submarine Canyon in California, USA. For westerly swells, which account for more than 90% of the wave conditions in the region, the sand tracers in the downcoast littoral drift were unable to bypass the canyon head. A flow convergence near the upcoast rim of the canyon intercepts the tracers and moves them either offshore onto the shelf just west of the canyon rim (low wave height conditions) or into the canyon head (storm wave conditions). This finding supports the notion that Mugu Canyon is the true terminus of the Santa Barbara Littoral Cell.

Conference Paper

Cross-shelf transport into nearshore waters due to shoaling internal tides in San Pedro Bay, CA

In the summer of 2001, a coastal ocean measurement program in the southeastern portion of San Pedro Bay, CA, was designed and carried out. One aim of the program was to determine the strength and effectiveness of local cross-shelf transport processes. A particular objective was to assess the ability of semidiurnal internal tidal currents to move suspended material a net distance across the shelf. Hence, a dense array of moorings was deployed across the shelf to monitor the transport patterns associated with fluctuations in currents, temperature and salinity. An associated hydrographic program periodically monitored synoptic changes in the spatial patterns of temperature, salinity, nutrients and bacteria. This set of measurements show that a series of energetic internal tides can, but do not always, transport subthermocline water, dissolved and suspended material from the middle of the shelf into the surfzone. Effective cross-shelf transport occurs only when (1) internal tides at the shelf break are strong and (2) subtidal currents flow strongly downcoast. The subtidal downcoast flow causes isotherms to tilt upward toward the coast, which allows energetic, nonlinear internal tidal currents to carry subthermocline waters into the surfzone. During these events, which may last for several days, the transported water remains in the surfzone until the internal tidal current pulses and/or the downcoast subtidal currents disappear. This nonlinear internal tide cross-shelf transport process was capable of carrying water and the associated suspended or dissolved material from the mid-shelf into the surfzone, but there were no observation of transport from the shelf break into the surfzone. Dissolved nutrients and suspended particulates (such as phytoplankton) transported from the mid-shelf into the nearshore region by nonlinear internal tides may contribute to nearshore algal blooms, including harmful algal blooms that occur off local beaches.

California

The Partition Intervalometer: A Programmable Underwater Timer for Marking Accumulated Sediment Profiles Collected in Anderson Sediment Traps: Development, Operation, Testing Procedures, and Field Results

This manual illustrates the development of a programmable instrument designed to deploy a series of wafer-shaped discs (partitions) into the collection tube of a sediment trap in various aquatic environments. These hydrodynamically shaped discs are deployed at discrete time intervals from the Intervalometer and provide markers that delineate time intervals within the sediments that accumulate in the collection tube. The timer and mechanical system are lodged in an air-filled, water-tight pressure housing that is vertically hung within the confines of a cone-shaped sediment trap. The instrumentation has been operationally pressure tested to an equivalent water depth of approximately 1 km. Flaws discovered during extensive laboratory and pressure testing resulted in the implementation of several mechanical modifications (such as a redesign of the rotor and the discs) that improved the operation of the rotor assembly as well as the release of discs through the end cap. These results also identified a preferred azimuth placement of the rotor disc relative to the drop hole of the end cap. In the initial field trial, five sediment traps and coupled Intervalometers were attached to moored arrays and deployed at two sites off the coast of Southern California for approximately 8 months. Each of the instruments released 18 discs at the programmed 10 day intervals, except one unit, which experienced a malfunction after approximately 4 months. Most of the discs oriented in a near-horizontal position upon the surface of the sediment in the collection tubes. Sampling of the sediments for geochemical analyses was improved by these clearly defined markers, which indicated the changes in the flux and nature of sediments accumulated during the deployment period of each sediment trap.

Open-File Report

Connections Among the Spatial and Temporal Structures in Tidal Currents, Internal Bores, and Surficial Sediment Distributions Over the Shelf off Palos Verdes, California

The topography of the Continental Shelf in the central portion of the Southern California Bight has rapid variations over relatively small spatial scales. The width of the shelf off the Palos Verdes peninsula, just northwest of Los Angeles, California, is only 1 to 3 km. About 7 km southeast of the peninsula, the shelf within San Pedro Bay widens to about 20 km. In 2000, the Los Angeles County Sanitation District began deploying a dense array of moorings in this complex region of the central Southern California Bight to monitor local circulation patterns. Moorings were deployed at 13 sites on the Palos Verdes shelf and within the northwestern portion of San Pedro Bay. At each site, a mooring supported a string of thermistors and an adjacent bottom platform housed an Acoustic Doppler Current Profiler. These instruments collected vertical profiles of current and temperature data continuously for one to two years. The variable bathymetry in the region causes rapid changes in the amplitudes and spatial structures of barotropic tidal currents, internal tidal currents, and in the associated nonlinear baroclinic currents that occur at approximate tidal frequencies. The largest barotropic tidal constituent is M2, the principal semidiurnal tide. The amplitude of this tidal current changes over fairly short along-shelf length scales. Tidal-current amplitudes are largest in the transition region between the two shelves; they increase from about 5 cm/s over the northern San Pedro shelf to nearly 10 cm/s on the southern portion of the Palos Verdes Shelf. Tidal-current amplitudes are then reduced to less than 2 cm/s over the very narrow section of the northern Palos Verdes shelf that lies just 6 km upcoast of the southern sites. Models suggest that the amplitude of the barotropic M2 tidal currents, which propagate toward the northwest primarily as a Kelvin wave, is adjusting to the short topographic length scales in the region. Semidiurnal sea-level oscillations are, as expected, independent of these topographic variations; they have a uniform amplitude and phase structure over the entire region. Because the cross-shelf angle of the seabed over most of the Palos Verdes shelf is 1 to 3 degrees, which is critical for the local generation and/or enhancement of nonlinear characteristics in semidiurnal internal tides, some internal tidal-current events have strong asymmetric current oscillations that are enhanced near the seabed. Near-bottom currents in these events are directed primarily offshore with amplitudes that exceed 30 cm/s. The spatial patterns in these energetic near-bottom currents have fairly short-length scales. They are largest over the inner shelf and in the transition region between the Palos Verdes and San Pedro shelves. This spatial pattern is similar to that found in the barotropic tidal currents. Because these baroclinic currents have an approximate tidal frequency, an asymmetric vertical structure, and a somewhat stable phase, they can produce a non-zero depth-mean flow for periods of a few months. These baroclinic currents can interact with the barotropic tidal current and cause an apparent increase (or decrease) in the estimated barotropic tidal-current amplitude. The apparent amplitude of the barotropic tidal current may change by 30 to 80 percent or more in a current record that is less than three months long. The currents and surficial sediments in this region are in dynamic equilibrium in that the spatial patterns in bottom stresses generated by near-bed currents from surface tides, internal tides, and internal bores partly control the spatial patterns in the local sediments. Coarser sediments are found in the regions with enhanced bottom stresses (that is, over the inner shelf and in the region between the Palos Verdes and San Pedro shelves). Finer sediments are found over the northwestern portion of the Palos Verdes shelf, where near-bottom currents are relatively weak. The nonlinear asymmetries in the i

Scientific Investigations Report

Comments on potential geologic and seismic hazards affecting proposed liquefied natural gas site in Santa Monica Bay, California

In a letter to the U.S. Geological Survey (USGS) dated March 25, 2008, Representative Jane Harman (California 36th district) requested advice on geologic hazards that should be considered in the review of a proposed liquefied natural gas (LNG) facility off the California coast in Santa Monica Bay. In 2004, the USGS responded to a similar request from Representative Lois Capps, regarding two proposed LNG facilities offshore Ventura County, Calif., with a report summarizing potential geologic and seismic hazards (Ross and others, 2004). The proposed LNG Deepwater Port (DWP) facility includes single point moorings (SPMs) and 35 miles of underwater pipelines. The DWP submersible buoys, manifolds, and risers would be situated on the floor of the southern Santa Monica Basin, in 3,000 feet of water, about 23 miles offshore of the Palos Verdes Peninsula. Twin 24-inch diameter pipelines would extend northeastward from the buoys across the basin floor, up the basin slope and across the continental shelf, skirting north around the Santa Monica submarine canyon. Figure 1 provides locations of the project and geologic features. Acronyms are defined in table 1. This facility is being proposed in a region of known geologic hazards that arise from both the potential for strong earthquakes and geologic processes related to sediment transport and accumulation in the offshore environment. The probability of a damaging earthquake (considered here as magnitude 6.5 or greater) in the next 30 years within about 30 miles (50 km) of the proposed pipeline ranges from 16% at the pipeline's offshore end to 48% where it nears land (Petersen, 2008). Earthquakes of this magnitude are capable of producing strong shaking, surface fault offsets, liquefaction phenomena, landslides, underwater turbidity currents and debris flow avalanches, and tsunamis. As part of the DWP license application for the Woodside Natural Gas proposal in Santa Monica Bay (known as the OceanWay Secure Energy Project), Fugro West, Inc., had already prepared a document discussing geologic hazards in the area, titled 'Exhibit B Topic Report 6 - Geological Resources' (Fugro West, Inc., 2007); hereafter, this will be called the 'Geological Resources document'. The USGS agreed to evaluate the information in the Geological Resources document regarding (1) proximity of active faults to the proposed project, (2) potential magnitude of seismic events from nearby faults, (3) thoroughness of the assessment of earthquake hazards in general, (4) potential hazards from ground rupture and strong shaking, (5) potential hazards from tsunamis, and (6) other geologic hazards including landslides and debris flows. Because two new earthquake probability reports were scheduled to be released in mid-April, 2008, by the USGS and the California Geological Survey (CGS), the USGS suggested a 6-month review period to enable a thorough incorporation of this new information. Twenty-seven scientists from the USGS and the CGS reviewed various sections of the Geological Resources document. This report outlines our major conclusions. The appendix is a longer list of comments by these reviewers, grouped by section of the Geological Resources document. Before discussing our reviews, we first provide a brief overview of geologic hazards in the proposed site area. This report is a snapshot in time and any future work in the area will need to take into account ongoing research efforts. For example, USGS scientists collected seismic reflection data in the spring of 2008 to study the structure and seismic potential of several faults in the area. Their interpretations (Conrad and others, 2008a and 2008b) are too preliminary to be included in this report, but their final results, along with other researchers' studies in the project area, should be considered in any future work on the Deepwater Port project.

California

Measurements of slope current and environmental geochemistry near the western boundary of the Gulf of the Farallones National Marine Sanctuary

For nearly a decade, dredged material from San Francisco Bay has been deposited at the U.S. Environmental Protection Agency (EPA) Region IX designated disposal site on the continental slope west of the Farallon Islands. Over the past several years, annual disposal volumes have ranged from 136,170 m3 (61 barge loads) to 2,407,600 m3 (1,173 barge loads) (Ota, personal communication, 2000). The EPA has conducted extensive studies to evaluate the fate and effects of the disposed material (Abdelrhman, 1992; Tetra-Tech, 1992; SAIC, 1992). The EPA has also maintained a long-term monitoring program to collect hydrodynamic, sedimentary, chemical, and biological data that are used to determine whether the dredged material adversely affects the ecology of adjacent water bodies and whether it moves from the disposal site, especially into the Gulf of the Farallones National Marine Sanctuary. As part of this monitoring program, the U.S. Geological Survey (USGS) Coastal and Marine Geology Program (CMGP) deployed arrays of instruments on three moorings near the EPA disposal site from November 1997 to November 1998. This report describes the results and findings of this field monitoring experiment.

California

Circulation and physical processes within the San Gabriel River Estuary during summer 2005

The Southern California Coastal Water Research Project (SCCWRP) is developing a hydrodynamic model of the SGR estuary, which is part of the comprehensive water-quality model of the SGR estuary and watershed investigated by SCCWRP and other local agencies. The hydrodynamic model will help understanding of 1) the exchange processes between the estuary and coastal ocean; 2) the circulation patterns in the estuary; 3) upstream natural runoff and the cooling discharge from PGS. Like all models, the SGR hydrodynamic model is only useful after it is fully calibrated and validated. In May 2005, SCCWRP requested the assistance of the U.S. geological Survey (USGS) Coastal and Marine Geology team (CMG) in collecting data on the hydrodynamic conditions in the estuary during the summer dry season. The summer was chosen for field data collection as this was assumed to be the season with the greatest potential for chronic degraded water quality due to low river flow and high thermal stratification within the estuary (due to both higher average air temperature and PGS output). Water quality can be degraded in winter as well, when higher river discharge events bring large volumes of water from the Los Angeles basin into the estuary. The objectives of this project were to 1) collect hydrodynamic data along the SGR estuary; 2) study exchange processes within the estuary through analysis of the hydrodynamic data; and 3) provide field data for model calibration and validation. As the data only exist for the summer season, the results herein only apply to summer conditions.

California

Hydratools manual version 1.0, documentation for a MATLAB ® -based post-processing package for the Sontek Hydra

The Sediment Transport Instrumentation Group (STG) at the U.S. Geological Survey (USGS) Woods Hole Science Center has a long-standing comitment to providing scientists with high quality oceanographic data. To meet this commitment, STG personnel are vigilant in checking data as well as hardware for signs of instrument malfunction. STG data sets are accompanied by processing histories to detail data processing procedures that may have modified the natural data signal while removing noise from the data. The history also allows the data to be reprocessed in the ligth of new insight into instrument function and moored conditions. This toolbox was compiled to meet these data quality commitments for data generated by Sontek Hydra systems using both ADV and PCADP probes. In the mid 1900's, the USGS Coastal and Marine Program began frequent deployments of Sontek Hydra systems in support of projects in estuaries, coastal, and continental shelf regions nationwide. Hydra data sets are large and complex in structure, and existing processing and editing tools consisted of fragments of MATLAB code written by USGS scientists to satisfy personal research needs. This code did not meet STG quality control criteria. This toolbox permits engineers and scientists to monitor data quality by: 1. processing data with interactive critical review; 2. preserving data quality indicators; 3. preserving minimally processed and partially processed versions of data sets. STG usually deploys ADV and PCADP probes configured as downward looking, mounted on bottom tripods, with the objective of measuring high-resolution near-bed currents. The velocity profiles are recorded with minimal internal data processing. Also recorded are parameters such as temperature, conductivity, optical backscatter, light transmission, and high frequency pressure. Sampling consists of high-frequency bursts(1–10 Hz) bursts of long duration (5–30 minutes) at regular and recurring intervals for a duration of 1 to 6 months. The result is very large data files, often 500 MB per Hydra, per deployment, in Sontek's compressed binary format. This section introduces the Hydratools toolbox and provides information about the history of the system's development. The USGS philosophy regarding data quality is discussed to provide an understating of the motivation for creating the system. General information about the following topics will also be discussed: hardware and software required for the system, basic processing steps, limitations of program usage, and features that are unique to the programs.

Open-File Report

Transport pathways in the lower reaches of Hood Canal

In 2003, studies revealed that the waters in the lower reaches of Hood Canal in Washington State had very low dissolved-oxygen concentrations, low enough to cause some fish kills between June and October of that year. In order to determine the transport patterns and the persistence of the low oxygen level in this portion of the canal, the U. S. Geological Survey deployed two instrumented platforms on the seabed near the head of the canal that measured currents over the whole water column, water level, near-bed temperature, salinity and oxygen for 2 months in the fall of 2004. Tidal currents, the dominant current component in the canal, flowed primarily along the canal axis and had speeds of 15-20 cm/s. There was also a persistent internal seiche that caused currents to flow along the canal axis with speeds of a few cm/s. The seiche, which had a period of a few days, caused currents in the surface layer to flow in an opposite direction to currents in water depths deeper than 15 m. A pool of warmer, saltier and more oxygenated water moved past the measurement sites toward the head of the canal with a speed of 1 cm/s. CTD measurements taken near the 2 measurement sites during the deployment indicated that this more oxygenated layer of water extended from the bed to the thermocline. Oxygen data from the tripods showed that this water remained in the region until at least the end of October 2004, when the tripods were recovered.

Washington