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Geology topics

Jeffrey N. Houser

Publications and source records attributed to Jeffrey N. Houser.

At least 19 recordsLinked to original sources

Decision analysis of long-term research and monitoring investments for the Upper Mississippi River Restoration program

Congressional authorization of the Water Resource Development Act of 2020 increased funding for the Upper Mississippi River Restoration (UMRR) program and its Long Term Resource Monitoring (LTRM) element. With adequate resources there is an opportunity for LTRM to expand its understanding of the Upper Mississippi River System, address unmet partner information needs, and better inform restoration and management of the Upper Mississippi River System. Additional information needs will need to be identified and prioritized in a manner that accounts for potential tradeoffs among the preferences of UMRR partners for long-term commitments of effort. In this report, we describe a decision analysis process used by UMRR partners to develop a comprehensive framework for prioritizing and selecting the information needs they would address in the event of changes in available resources. The partners of the UMRR formed a “planning team” with members representing the UMRR partner agencies to work through the decision analysis process. This team included two facilitators who led the decision analysis process. The planning team began this process by articulating a consensus understanding of the specific decisions to be made and identifying a set of decision outcomes (objectives) the UMRR partners wanted to achieve. Next, they identified information needs not being addressed by ongoing monitoring and research, developed criteria for assessing the expected benefit of addressing each information need, and estimated the costs of addressing each information need. They then used an optimization approach to identify the portfolio of information needs that would produce the most benefit for a given cost if they were effectively addressed. Originally, the planning team expected this analysis to inform a project plan that would start in 2024, but in recognition of financial uncertainties, we refer to planning dates as the number of years after resources become available (for example, “year 1,” “year 2,” and so on).

Illinois, Iowa, Minnesota, Missouri, Wisconsin

Climate and connectivity mediate overwintering habitat suitability for centrarchids in a large floodplain river network

Availability of suitable overwintering habitat is crucial for the survival of centrarchids in large floodplain rivers. However, there remains uncertainty in the spatiotemporal drivers of suitable conditions. We paired hydrogeomorphic characteristics with environmental data from 1994 to 2018 in individual lentic areas to (1) assess overwintering habitat availability throughout the Upper Mississippi River System using existing habitat suitability indices (HSIs) and (2) explore potential drivers of overall habitat suitability (HSI O ) and its components (dissolved oxygen, temperature, and flow). We found that flow velocities that exceeded suitable thresholds were independently responsible for 53% of nonsuitable habitats, and connectivity with lotic channels and river discharge increased velocity within lentic habitats. Additionally, colder winter conditions reduced water temperature, reducing availability of highly suitable habitat. Our results indicate that although warmer winters could increase the availability of highly suitable habitat for centrarchids, changes in flow regimes could lead to more connected areas becoming unsuitable. Our results provide critical information on factors that can be prioritized to manage centrarchid habitat, which is especially important in the context of uncertain future climate.

upper Mississippi River

Intrinsic and extrinsic regulation of water clarity in a large, floodplain-river ecosystem

Ecosystem processes in rivers are thought to be controlled more by extrinsic than intrinsic factors, that is, the result of processes that occur upstream or within their watersheds. However, large floodplain rivers have a diverse assemblage of aquatic areas spanning gradients of connectivity with the main channel and internal controls may at times regulate long-term dynamics. When and where internal controls are important has not been widely explored in rivers. The Upper Mississippi River System (UMRS) provides a unique opportunity to assess regulation of ecosystem processes in a large floodplain river as water clarity has increased in several reaches over the last two decades. To better understand when and where intrinsic variables (for example , aquatic vegetation and common carp) and extrinsic variables (for example , upstream main channel total suspended solids (TSS) concentration and discharge) regulate water clarity, we describe 24-year trends of TSS in six study reaches of the UMRS. We evaluated the degree to which trends were shared across aquatic areas within each study reach and identified potential drivers of long-term TSS dynamics. Results varied across and within UMRS reaches, but common carp abundance was the strongest predictor in nearly all study reaches. Several models indicated associations with both intrinsic and extrinsic factors, and the marginal model r 2 values (0.26–0.61) suggest that additional environmental factors may have influenced water clarity. Knowledge of the degree to which intrinsic and extrinsic processes regulate water clarity is important for understanding and managing large, floodplain rivers worldwide.

Ecosystems

River geomorphology affects biogeochemical responses to hydrologic events in a large river ecosystem

Shifts in the frequency and intensity of high discharge events due to climate change may have important consequences for the hydrology and biogeochemistry of rivers. However, our understanding of event-scale biogeochemical dynamics in large rivers lags that of small streams. To fill this gap, we used high-frequency sensor data collected during four consecutive summers from a main channel and backwater site of the Upper Mississippi River. We identified high discharge events and calculated event concentration-discharge responses for both physical-chemical (nitrate, turbidity, and fluorescent dissolved organic matter) and biological (chlorophyll-a and cyanobacteria) constituents using metrics of hysteresis and slope. We found a range of responses across events, particularly for nitrate. Although fluorescent dissolved organic matter (FDOM) and turbidity exhibited more consistent responses across events, contrasting hysteresis metrics indicated that FDOM was flushed to the river from more distant sources than turbidity. Biological responses (chlorophyll a and cyanobacteria) differed more between sites than physical and chemical constituents. Lastly, we found that the event characteristics best explaining concentration responses differed between sites, with event magnitude more frequently related to responses in the main channel, and antecedent wetness conditions associated with response variation in the backwater. Our results indicate that event responses in large rivers are distinct across the diverse habitats and biogeochemical components of a large floodplain river, which has implications for local and downstream ecosystems as the climate shifts.

Minnesota, Wisconsin

Resisting-accepting-directing: Ecosystem management guided by an ecological resilience assessment

As anthropogenic influences push ecosystems past tipping points and into new regimes, complex management decisions are complicated by rapid ecosystem changes that may be difficult to reverse. For managers who grapple with how to manage ecosystems under novel conditions and heightened uncertainty, advancing our understanding of regime shifts is paramount. As part of an ecological resilience assessment, researchers and managers have collaborated to identify alternate regimes and build an understanding of the thresholds and factors that govern regime shifts in the Upper Mississippi River System. To describe the management implications of our assessment, we integrate our findings with a recently developed framework that explicitly acknowledges ecosystem regime change and outlines management approaches of resisting change, accepting change, or directing change. More specifically, we developed guidance for using knowledge of desirability of current conditions, distance to thresholds, and general resilience (that is, an ecosystem’s capacity to cope with uncertain disturbances) to navigate the resist-accept-direct (RAD) framework. We applied this guidance to outline strategies that resist, accept, or direct change in the context of management of aquatic vegetation, floodplain vegetation, and fish communities across nearly 2000 river kilometers. We provide a case study for how knowledge of ecological dynamics can aid in assessing which management approach(es) are likely to be most ecologically feasible in a changing world. Continued learning from management decisions will be critical to advance our understanding of how ecosystems respond and inform the management of ecosystems for desirable and resilient outcomes.

Illinois, Iowa, Kentucky, Minnesota, Missouri, Wis

Warmer winters increase the biomass of phytoplankton in a large floodplain river

Winters are changing rapidly across the globe but the implications for aquatic productivity and food webs are not well understood. In addition, the degree to which winter dynamics in aquatic systems respond to large-scale climate versus ecosystem-level factors is unclear but important for understanding and managing potential changes. We used a unique winter data set from the Upper Mississippi River System to explore spatial and temporal patterns in phytoplankton biomass (chlorophyll a , CHL) and associated environmental covariates across 25 years and ∼1,500 river km. To assess the role of regional climate versus site-specific drivers of winter CHL, we evaluated whether there were coherent long-term CHL dynamics from north to south and across lotic-lentic areas. We then estimated the degree to which these patterns were associated with climate variability (i.e., the Multivariate El Nino-Southern Oscillation Index), winter severity (freezing degree days), river discharge, or site-specific environmental variables (ice depth, snow depth, and nutrient concentrations). We found that winter CHL was typically highest in ice-free reaches and backwater lakes, occasionally exceeding summer values. We did not find highly synchronous CHL dynamics across the basin, but instead show that temporal trends were independent among river reaches and lotic-lentic areas of the river. Moreover, after accounting for these spatial dynamics, we found that CHL was most responsive to winter air temperature, being consistently higher in years with warmer winters across the basin. These results indicate that although productivity dynamics are highly dynamic within large river ecosystems, changes in the duration and severity of winter may uniformly increase wintertime productivity.

Minnesota, Missouri, Illinois, Iowa, Wisconsin

Understanding constraints on submersed vegetation distribution in a large, floodplain river: The role of water level fluctuations, water clarity and river geomorphology

Aquatic vegetation is a key component of large floodplain river ecosystems. In the Upper Mississippi River System (UMRS), there is a long-standing interest in restoring aquatic vegetation in areas where it has declined or disappeared. To better understand what constrains vegetation distribution in large river ecosystems and inform ongoing efforts to restore submersed aquatic vegetation (SAV), we delineated areas in ~1200 river km of the UMRS where the combined effects of water clarity, water level fluctuation, and bathymetry appeared suitable for establishment and persistence of SAV based on a 22-year dataset for total suspended solids (TSS), water surface elevation, and aquatic vegetation distribution. We found a large increase in suitable area downstream from a large natural riverine lake near the northern end of the UMRS (river km 1230) that functions as a sink for suspended material. Downstream from river km 895, there was much less suitable area due to decreased water clarity from tributary input of suspended material, changes in river geomorphology, and increased water level fluctuation. A hypothetical scenario of 75% reduction in TSS resulted in only minor increases in suitable area in the southern portion of the UMRS, indicating limitations by water level fluctuation and/or bathymetry (i.e., limited shallow area). These results improve our understanding of the structure and function of large river systems by illustrating how water clarity, fluctuations in water level, and river geomorphology interact to create complex spatial patterns in habitat suitability for aquatic species and may help to identify locations most and least likely to benefit from management and restoration efforts.

Illinois, Iowa, Minnesota, Missouri, Wisconsin

Spatial and temporal dynamics of phytoplankton assemblages in the upper Mississippi River

Phytoplankton provide large quantities of organic carbon and biomolecules that support large river ecosystems. However, when certain groups become overabundant (e.g., cyanobacteria), they can pose a risk to human health and river biota. The purpose of this study was to examine the spatial and temporal dynamics of phytoplankton community composition within the upper Mississippi River. More specifically, we analyzed samples from main channel, impounded, and backwater areas of Navigation Pools 8 and 13 to examine lateral variability within each of these pools. We analyzed samples from the main channel of Pool 26 to examine longitudinal variation among Pools 8, 13, and 26. Phytoplankton and water quality samples were collected during the summer months of 2006–2009. The main channels of Pool 8 and Pool 13 were generally dominated by diatoms, although cyanobacteria were (at times) more abundant. The backwaters were generally dominated by cyanobacteria and typified by flagellated species (e.g., cryptomonads and euglenoids). The main channel of Pool 26 was always dominated by diatoms. Discharge influenced phytoplankton community composition. In Pool 26, taxonomic richness tended to increase with increasing discharge. There were no linear correlations between cyanobacteria total or proportional biovolume and nutrient concentrations, indicating that nutrient limitation was not common. Differences in phytoplankton communities were generally associated with physical factors such as discharge, turbidity, and residence time.

River Research and Applications

Conceptualizing alternate regimes in a large floodplain-river ecosystem

Regime shifts –persistent changes in the structure and function of an ecosystem - are well-documented in many ecosystems but remain poorly understood in floodplain-river ecosystems. We apply a resilience perspective to large floodplain-river ecosystems by presenting three examples of plausible sets of alternate regimes that are relevant to natural resource management interests within the Upper Mississippi River and Illinois River. These alternate regimes include: 1) a clear water and abundant vegetation regime vs. a turbid water and sparse vegetation regime in lentic, off-channel areas, 2) a diverse native fish community regime vs. an invasive-dominated fish community regime, and 3) a regime characterized by a diverse and dynamic mosaic of floodplain vegetation types vs. one characterized as a persistent invasive wet meadow monoculture. For each set of potential alternate regimes, we synthesize known or hypothesized feedback mechanisms that reinforce regimes, controlling variables that drive regime transitions, and restoration pathways. The conceptual models presented here provide a framework for synthesizing our understanding of the dynamics of this ecosystem and are relevant to other large floodplain-river ecosystems that face similar human pressures across the world. The models are currently being used to prioritize future research, test hypotheses, and inform restoration and management on the Upper Mississippi River and Illinois River. Through sharing our approach, we provide a case study in which we document an important step in operationalizing resilience concepts for the management of natural resources.

Minnesota, Wisconsin, Iowa, Illinois, Missouri

Light exposure along particle flowpaths in large rivers

Sunlight is a critical resource in aquatic systems driving photosynthesis, photodegradation of organic matter and contaminants, animal behavior, and the activity of human pathogens. In rivers, solutes, materials, and organisms are turbulently mixed across the water column during downstream transport and exposed to highly variable sunlight. However, there are no measurements of suspended particles' sunlight exposure during downstream transport to characterize this variability, and it is unclear if current measurement approaches and optical theory capture the light exposure of suspended particles. We deployed neutrally buoyant drifters and stationary buoys in the Upper Mississippi (WI, U.S.A.) and Neuse Rivers (NC, U.S.A.) to measure underwater sunlight from the perspective of suspended particles. In our study sites, underwater sunlight varied more along flowpaths measured by drifters than over time measured by fixed‐site buoys; sunlight exposure along flowpaths was dominated by bursts of light (sunflecks) that accounted for 62–99% of the cumulative sunlight exposure; and modeled sunlight exposure using optical theory was consistently 56–1700% higher than measured sunlight exposure along flowpaths. Our results suggested that suspended particles in the study reaches experienced darker conditions than predicted and have important implications for how to quantify underwater sunlight in rivers.

North Carolina, Wisconsin

Applying concepts of general resilience to large river ecosystems: A case study from the Upper Mississippi and Illinois rivers

Large floodplain-river ecosystems are often highly modified to provide services that society desires, yet these modifications can limit an ecosystem’s ability to adapt to changing conditions. The adaptive capacity of an ecosystem, its general resilience, is a conceptual framework for considering how a system will respond to such changes. We sought to apply aspects of three general resilience principles (diversity and redundancy, connectivity, and controlling variables) to our understanding of floodplain-river ecosystem structure and function. We demonstrate the applicability of this approach in a case study of the Upper Mississippi River System (UMRS). In doing so, we developed ten indicators that highlight important structural and functional aspects of this floodplain-river ecosystem, and likely underlie the capacity of large rivers to cope with environmental change and disturbance. We developed diversity and redundancy indicators for aquatic habitats, patterns of floodplain inundation, and fish communities. Connectivity indicators included metrics of longitudinal and lateral connections. Controlling variable indicators included deviations from historic water surface elevation fluctuations, water clarity, nutrient concentrations, and aquatic invasive species. This set of indicators provides a simple description of the adaptive capacity of four distinct reaches of the UMRS: Upper Impounded, Lower Impounded, Unimpounded Reaches of the Upper Mississippi River and the entire Illinois River. High aquatic habitat diversity and redundancy, fish functional diversity and redundancy, and water clarity, and the scarcity of invasive fish species are all factors that likely contribute to the high general resilience of the Upper Impounded Reach. However, the limited longitudinal connectivity and establishment of a minimum water level for navigation are factors that may inhibit the general resilience of this reach. In the Lower Impounded Reach, there is high within-reach variability for individual indicators such as aquatic habitat diversity, fish functional diversity and redundancy, and longitudinal and lateral connectivity. In the Unimpounded Reach, a high degree of longitudinal connectivity likely enhances its general resilience, but low aquatic habitat diversity, low lateral connectivity, and relatively high number of invasive fish species inhibit general resilience. For the Illinois River Reach, the relatively high fish functional diversity and redundancy likely contributes to its general resilience, whereas high number of invasive fish species, low water clarity, low lateral connectivity, and high range of water levels may inhibit general resilience. Indicators derived from application of concepts of general resilience provide insight into the current coping capacity of the UMRS and identify opportunities for enhancing resilience.

Upper Mississippi River System

Indicators of ecosystem structure and function for the Upper Mississippi River System

This report documents the development of quantitative measures (indicators) of ecosystem structure and function for use in a Habitat Needs Assessment (HNA) for the Upper Mississippi River System (UMRS). HNAs are led periodically by the U.S. Army Corps of Engineers’ Upper Mississippi River Restoration (UMRR) Program, which is the primary habitat restoration program on the UMRS. The UMRR Program helps determine how Federal, State and nongovernmental agencies can best address environmental issues on one of the world’s largest and most diverse river systems. Each indicator in this report represents at least one management objective developed for the river system. These objectives were developed in a previous planning effort using an ecosystem management conceptual framework (USACE, 2011). The objectives represent five essential ecosystem characteristics: hydraulics and hydrology, biogeochemistry, geomorphology, habitat, and biota. Subsequent to the 2011 planning effort, the UMRR increased its focus on improving the health and resilience of the UMRS. The indicators presented here are based on the five essential ecosystem characteristics and four aspects of ecosystems thought to support general ecosystem resilience (the ability of an ecosystem to adapt and respond to disturbances): (1) connectivity, (2) diversity and redundancy, (3) controlling variables, and (4) slow processes. Thus, we developed indicators that quantify both essential ecosystem characteristics and characteristics of a resilient river system. The indicators documented in this report focus on important aspects of river floodplain hydrogeomorphology, given the fundamental role hydrogeomorphology plays in determining habitat conditions and ecosystem health and resilience at broad geographic scales. The information contained within this report provides a broader scale (for example, system-wide) context for management decisions made at finer scales (for example, within river reaches or at project sites) and is designed for use in the formal system-wide Habitat Needs Assessment II (HNA–II) led by the UMRR Program.

Upper Mississippi River System

Limited nitrate retention capacity in the Upper Mississippi River

The Mississippi River and other large rivers have the potential to regulate nitrogen export from terrestrial landscapes, and thus mitigate eutrophication in downstream aquatic ecosystems. In large rivers, human-constructed impoundments and connected backwaters may facilitate nitrogen removal; however, the capacity of these features is poorly quantified and incompletely incorporated into model frameworks. Using a high-resolution and spatially intensive sampling technique, we assessed the contribution of individual navigation pools, as well as impounded open waters and backwater wetlands within them, to overall nitrate retention by mapping the entire length (1370 km) of the Upper Mississippi River (UMR) main channel. Based on this single spatial survey of water chemistry, the river appeared to act primarily as a passive nitrate transporter, retaining only 12.5% of the incoming load, most of which occurred in the upper 150 km of the river, which includes the largest and only naturally impounded reach of the river. Although reservoirs typically are nitrogen sinks, our data indicate that UMR dams do not impede river flows to the extent necessary to promote substantial changes in water residence times and subsequent nitrogen removal. Backwaters routinely had lower nitrate concentrations than the main channel, but their limited hydrologic connectivity to the through-flowing river channel constrained their influence on downstream export. As a whole, the UMR did not remove a substantial proportion of its nitrate load despite optimal N removal conditions, numerous impoundments, and the presence of extensive backwater habitats. These results suggest that efforts to reduce delivery of nitrogen to the Gulf of Mexico should emphasize mitigation strategies that target upland nutrient sources rather than relying on removal within the Mississippi River.

Upper Mississippi River

Developing a shared understanding of the Upper Mississippi River: the foundation of an ecological resilience assessment

The Upper Mississippi River System (UMRS) is a large and complex floodplain river ecosystem that spans the jurisdictions of multiple state and federal agencies. In support of ongoing ecosystem restoration and management by this broad partnership, we are undertaking a resilience assessment of the UMRS. We describe the UMRS in the context of an ecological resilience assessment. Our description articulates the temporal and spatial extent of our assessment of the UMRS, the relevant historical context, the valued services provided by the system, and the fundamental controlling variables that determine its structure and function. An important objective of developing the system description was to determine the simplest, adequate conceptual understanding of the UMRS. We conceptualize a simplified UMRS as three interconnected subsystems: lotic channels, lentic off-channel areas, and floodplains. By identifying controlling variables within each subsystem, we have developed a shared understanding of the basic structure and function of the UMRS, which will serve as the basis for ongoing quantitative evaluations of factors that likely contribute to the resilience of the UMRS. As we undertake the subsequent elements of a resilience assessment, we anticipate our improved understanding of interactions, feedbacks, and critical thresholds will assist natural resource managers to better recognize the system’s ability to adapt to existing and new stresses.

Ecology and Society

Long-term decreases in phosphorus and suspended solids, but not nitrogen, in six upper Mississippi River tributaries, 1991–2014

Long-term trends in tributaries provide valuable information about temporal changes in inputs of nutrients and sediments to large rivers. Data collected from 1991 to 2014 were used to investigate trends in total nitrogen (TN), total phosphorus (TP), nitrate (NO3–N), soluble-reactive P (SRP), and total suspended solids (TSS) in the following six tributaries of the upper Mississippi River: Cannon (CaR; Minnesota (MN)), Maquoketa (MR; Iowa (IA)), Wapsipinicon (WR; IA), Cuivre (CuR; Missouri (MO)), Chippewa (ChR; Wisconsin (WI)), and Black (BR; WI) rivers. Weighted regression on time discharge and season was used to statistically remove effects of random variation in discharge from estimated trends in flow-normalized concentrations and flux. Concentration and flux of TSS declined in all six rivers. Concentration of P declined in four of the rivers, and P flux declined in five rivers. Concentration and flux of N exhibited small changes relative to TP. TN concentration and flux did not change substantially in four of the rivers and decreased in two (ChR, CuR). Nitrate concentration and flux increased in three rivers (ChR, BR, CaR) and remained relatively constant in the other three rivers. General declines in P and TSS suggest that improvements in agricultural land management, such as the adoption of conservation tillage and enrollment of vulnerable acreage into the Conservation Reserve Program, may have reduced surface runoff; similar reductions in N were not observed.

Illinois, Iowa, Minnesota, Missouri, Wisconsin

Patchiness in a large floodplain river: Associations among hydrology, nutrients, and fish communities

Large floodplain rivers have internal structures shaped by directions and rates of water movement. In a previous study, we showed that spatial variation in local current velocities and degrees of hydrological exchange creates a patch-work mosaic of nitrogen and phosphorus concentrations and ratios in the Upper Mississippi River. Here, we used long-term fish and limnological data sets to test the hypothesis that fish communities differ between the previously identified patches defined by high or low nitrogen to phosphorus ratios (TN:TP) and to determine the extent to which select limnological covariates might explain those differences. Species considered as habitat generalists were common in both patch types but were at least 2 times as abundant in low TN:TP patches. Dominance by these species resulted in lower diversity in low TN:TP patches, whereas an increased relative abundance of a number of rheophilic (flow-dependent) species resulted in higher diversity and a more even species distribution in high TN:TP patches. Of the limnological variables considered, the strongest predictor of fish species assemblage and diversity was water flow velocity, indicating that spatial patterns in water-mediated connectivity may act as the main driver of both local nutrient concentrations and fish community composition in these reaches. The coupling among hydrology, biogeochemistry, and biodiversity in these river reaches suggests that landscape-scale restoration projects that manipulate hydrogeomorphic patterns may also modify the spatial mosaic of nutrients and fish communities. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

River Research and Applications

Contrasts between channels and backwaters in a large, floodplain river: Testing our understanding of nutrient cycling, phytoplankton abundance, and suspended solids dynamics

In floodplain rivers, variability in hydraulic connectivity interacts with biogeochemistry to determine the distribution of suspended and dissolved substances. Nutrient, chlorophyll a , and suspended solids data spanning longitudinal (5 study reaches across 1300 river km), lateral (main channel and backwaters), and temporal (1994–2011) gradients in the Upper Mississippi River (UMR) were used to examine the extent to which observed differences between the main channel and backwaters were consistent with expectations based on current understanding of biogeochemical processes in large rivers. For N and P, the results largely conformed to expectations. N concentrations were greater in the main channel than in the backwaters in 82 to 96% of the observations across river reaches. Maximum TP concentrations generally occurred in backwaters during summer, when backwater TP often exceeded that of the main channel. Flux of P from sediments may be a substantial source of water-column P in UMR backwaters in summer. The data for suspended solids and chlorophyll a suggest that some refinements are needed of our understanding of ecosystem processes in large rivers. During low-discharge conditions, concentrations of inorganic suspended solids often were greater in backwaters than in the main channel, suggesting the importance of sediment resuspension. Chlorophyll a concentrations were usually greater in backwaters than in the main channel, but exceptions indicate that phytoplankton abundance in the main channel of the UMR can sometimes be greater than is typically expected for large rivers.

Freshwater Science

Ecosystem metabolism and nutrient dynamics in the main channel and backwaters of the Upper Mississippi River

Photosynthesis and respiration are primary drivers of dissolved oxygen dynamics in rivers. We measured dissolved oxygen dynamics, aquatic ecosystem metabolism, algal abundance and nutrient concentrations at main channel and backwater sites on a reach of the Upper Mississippi River that borders the states of Wisconsin and Minnesota (U.S.A.). We asked (i) how ecosystem metabolism rates, dissolved oxygen dynamics and nutrient concentrations differed in the main channel and in backwaters, (ii) whether ecosystem metabolism relates to solar irradiance, nutrient concentration, algal abundance, temperature and river discharge and (iii) whether the relationships between ecosystem metabolism and these environmental factors differs between the main channel and backwaters. The rates of aquatic ecosystem metabolism in the main channel were among the highest reported for large rivers. Mean daily gross primary production (GPP), ecosystem respiration (R) and net ecosystem production (NEP) in the main channel in the 2006 growing season were 10, 6 and 4 g O 2 m 2 d −1 , respectively. Solar irradiance, discharge and temperature, rather than nutrients, accounted for most temporal variability in gross primary production (GPP). Discharge was negatively associated with GPP in the main channel and temperature positively associated with GPP in backwaters. Primary production consistently exceeded respiration in the main channel in summer, resulting in persistent oxygen supersaturation from late June to early August. Maximum chlorophyll concentrations (˜140 μg L −1 ) were observed in the main channel, rather than the backwaters. Nitrogen and phosphorus exhibited contrasting temporal patterns in backwaters probably reflecting differences in their sources and sinks; N declined during the growing season while P increased.

Minnesota, Wisconsin