USGS ScienceSearch

Geology topics

Jeffrey D. Muehlbauer

Publications and source records attributed to Jeffrey D. Muehlbauer.

8 recordsLinked to original sources

Applied citizen science in freshwater research

Worldwide, scientists are increasingly collaborating with the general public. Citizen science methods are readily applicable to freshwater research, monitoring, and education. In addition to providing cost-effective data on spatial and temporal scales that are otherwise unattainable, citizen science provides unique opportunities for engagement with local communities and stakeholders in resource management and decision-making. However, these methods are not infallible. Citizen science projects require deliberate planning in order to collect high data quality and sustain meaningful community partnerships. Citizen science practitioners also have an ethical responsibility to ensure that projects are not putting the safety of participants at stake. We discuss here how citizen science is being applied in freshwater research, emerging challenges in project planning and implementation, as well as how citizen science is shaping public understanding, policy, and management of freshwaters.

WIREs Water

Spatial population structure of a widespread aquatic insect in the Colorado River Basin: Evidence for a Hydropsyche oslari species complex

Structural connectivity and dispersal ability are important constraints on functional connectivity among populations. For aquatic organisms that disperse among stream corridors, the regional structure of a river network can, thus, define the boundaries of gene flow. In this study, we used mitochondrial DNA (mtCO1 barcoding gene) to examine the genetic diversity and population structure of a caddisfly with strong dispersal capabilities, Hydropsyche oslari (Trichoptera:Hydropsychidae), in the topologically-diverse Colorado River Basin. We expected to find less genetic differentiation among populations of H . oslari within the Upper Basin, which has a dense dendritic network of perennial tributaries that allow for greater potential dispersal and gene flow, than among populations within the arid and sparse river network of the Lower Basin. We also expected to find genetic differentiation among H. oslari in the Upper and Lower Basins because contemporary populations are geographically distant from each other and have been separated by a >300-km-long reservoir (Lake Powell) for ½ a century. Consistent with these predictions, we found that populations of H . oslari within the Upper Basin had more shared haplotypes and less nucleotide diversity (π = 0.001–0.008) than H . oslari within the Lower Basin ( F ST = 0.01, π = 0.014–0.028). However, populations were genetically more structured in the Upper Basin ( F ST = 0.47) than in the Lower Basin ( F ST = 0.01). We also found that populations in the Upper and Lower Basin are entirely genetically differentiated ( S nn = 1), suggesting that these 2 populations were isolated thousands of years before the 1963 closure of Glen Canyon Dam and subsequent filling of Lake Powell. The most similar haplotypes among the 2 basins represent a 5.4% difference, which indicates the presence of a species complex within H. oslari .

Colorado River Basin

Incorporating temporal heterogeneity in environmental conditions into a somatic growth model

Evaluating environmental effects on fish growth can be challenging because environmental conditions may vary at relatively fine temporal scales compared to sampling occasions. Here we develop a Bayesian state-space growth model to evaluate effects of monthly environmental data on growth of fish that are observed less frequently (e.g., from mark-recapture data where time between captures can range from months to years). We assess effects of temperature, turbidity duration, food availability, flow variability, and trout abundance on subadult humpback chub (Gila cypha) growth in two rivers, the Colorado River (CR) and the Little Colorado River (LCR), and we use out-of-sample prediction to rank competing models. Environmental covariates explained a high proportion of the variation in growth in both rivers; however, the best growth models were river-specific and included either positive temperature and turbidity duration effects (CR) or positive temperature and food availability effects (LCR). Our approach to analyzing environmental controls on growth should be applicable in other systems where environmental data vary over relatively short time scales compared to animal observations.

Canadian Journal of Fisheries and Aquatic Sciences

Deleterious effects of net clogging on the quantification of stream drift

Drift studies are central to stream and river ecological research. However, a fundamental aspect of quantifying drift — how net clogging affects the accuracy of results — has been widely ignored. Utilizing approaches from plankton and suspended sediment studies in oceanography and hydrology, we examined the rate and dynamics of net clogging across a range of conditions. We found that nets clog nonlinearly over time and that suspended solid concentrations and net mesh size exerted a strong effect on clogging rates. Critically, net clogging introduced unpredictable biases in resultant data due to the inaccuracies in water volume estimates introduced by progressive clogging. This renders the widespread approach to linearly “correct” for clogging inadequate. Using a meta-analysis of 77 drift studies spanning 25 years, we demonstrate that the detrimental effects of net clogging are routinely unappreciated, even though the results of most of these studies were likely affected by clogging. We close by describing an approach for avoiding net clogging, which will increase the accuracy and reproducibility of results in future freshwater, lotic drift studies.

Canadian Journal of Fisheries and Aquatic Sciences

Flow management for hydropower extirpates aquatic insects, undermining river food webs

Dams impound the majority of rivers and provide important societal benefits, especially daily water releases that enable on-peak hydroelectricity generation. Such “hydropeaking” is common worldwide, but its downstream impacts remain unclear. We evaluated the response of aquatic insects, a cornerstone of river food webs, to hydropeaking using a life history–hydrodynamic model. Our model predicts that aquatic-insect abundance will depend on a basic life-history trait—adult egg-laying behavior—such that open-water layers will be unaffected by hydropeaking, whereas ecologically important and widespread river-edge layers, such as mayflies, will be extirpated. These predictions are supported by a more-than-2500-sample, citizen-science data set of aquatic insects from the Colorado River in the Grand Canyon and by a survey of insect diversity and hydropeaking intensity across dammed rivers of the Western United States. Our study reveals a hydropeaking-related life history bottleneck that precludes viable populations of many aquatic insects from inhabiting regulated rivers.

BioScience

Resource subsidies between stream and terrestrial ecosystems under global change

Streams and adjacent terrestrial ecosystems are characterized by permeable boundaries that are crossed by resource subsidies. Although the importance of these subsidies for riverine ecosystems is increasingly recognized, little is known about how they may be influenced by global environmental change. Drawing from available evidence, in this review we propose a conceptual framework to evaluate the effects of global change on the quality and spatiotemporal dynamics of stream–terrestrial subsidies. We illustrate how changes to hydrological and temperature regimes, atmospheric CO 2 concentration, land use and the distribution of nonindigenous species can influence subsidy fluxes by affecting the biology and ecology of donor and recipient systems and the physical characteristics of stream–riparian boundaries. Climate-driven changes in the physiology and phenology of organisms with complex life cycles will influence their development time, body size and emergence patterns, with consequences for adjacent terrestrial consumers. Also, novel species interactions can modify subsidy dynamics via complex bottom-up and top-down effects. Given the seasonality and pulsed nature of subsidies, alterations of the temporal and spatial synchrony of resource availability to consumers across ecosystems are likely to result in ecological mismatches that can scale up from individual responses, to communities, to ecosystems. Similarly, altered hydrology, temperature, CO 2 concentration and land use will modify the recruitment and quality of riparian vegetation, the timing of leaf abscission and the establishment of invasive riparian species. Along with morphological changes to stream–terrestrial boundaries, these will alter the use and fluxes of allochthonous subsidies associated with stream ecosystems. Future research should aim to understand how subsidy dynamics will be affected by key drivers of global change, including agricultural intensification, increasing water use and biotic homogenization. Our conceptual framework based on the match–mismatch between donor and recipient organisms may facilitate understanding of the multiple effects of global change and aid in the development of future research questions.

Global Change Biology

Building a better sticky trap: description of an easy-to-use trap and pole mount for quantifying the abundance of adult aquatic insects

Insect emergence is a fundamental process in freshwaters. It is a critical life-history stage for aquatic insects and provides an important prey resource for terrestrial and aquatic consumers. Sticky traps are increasingly being used to sample these insects. The most common design consists of an acetate sheet coated with a nondrying adhesive that is attached to a wire frame or cylinder. These traps must be prepared at the deployment site, a process that can be time consuming and difficult given the vagaries of field conditions. Our goals were to develop a sturdy, low-cost sticky trap that could be prepared in advance, rapidly deployed and recovered in the field, and used to estimate the flight direction of insects. We used 150-mm Petri dishes with lids. The dishes can be coated cleanly and consistently with Tangle-Trap® adhesive. Deploying traps is simple and requires only a pole set near the body of water being sampled. Four dishes can be attached to the pole using Velcro and aligned in 4 different directions to enable quantification of insect flight direction. After sampling, Petri dishes can be taped closed, packed in boxes, and stored indefinitely. Petri traps are comparable in price to standard acetate sheet traps at ∼US$0.50/directional deployment, but they require more space for storage than acetate sheet traps. However, a major benefit of Petri traps is that field deployment times are ⅓ those of acetate traps. Our study demonstrated that large Petri dishes are an ideal platform for sampling postemergent adult aquatic insects, particularly when the study design involves estimating flight direction and when rapid deployment and recovery of traps is critical.

Freshwater Science

Barcodes are a useful tool for labeling and tracking ecological samples

Barcodes are used to label and track just about everything these days. Look around your office, in your medicine cabinet, at the package you just received in the mail, or on the shelves of any shop in town, and you will immediately grasp the ubiquity of their use. Interestingly, railroads and supermarkets were the early pioneers of barcode development: the former needing a way to track railway car location and ownership on a national scale, the latter needing a way to track a diverse array of products and to decrease checkout times (Nelson 1997). Barcodes first came to use in the sciences via the field of medicine, and the medical literature contains hundreds of publications describing how this technology has reduced errors in patient specimen identification and handling, where error mitigation is crucial. In short, barcodes have been adopted by many industries, and in many fields they are now synonymous with asset tracking. In spite of their potential to efficiently organize “assets” (i.e., samples) and minimize human error, the use of barcodes has yet to gain widespread application in ecology. In an age where students take notes on laptops instead of paper, and where “text messaging” involves a smartphone rather than a ball‐point pen, why do otherwise tech‐savvy ecologists persist in hand‐labeling samples? Why do we repeatedly transcribe long and unique identifiers at each step in the process of sample analysis, thereby wasting time and creating opportunities for transcription errors and data loss? Why are most sample storage areas only successfully navigable by the lab manager who personally shelved the samples? In the case of our large ecology lab—and, we suspect, in many others as well—the answer to these questions was perpetually, “bar‐coding won't be worth the trouble.” Recently, however, we realized this was no longer a sufficient answer when we started a new research project that involved collecting an additional thousands of samples each year; we decided to embrace the tangible benefits of an electronic labeling system, and implemented barcoding in our lab. To be clear, the use of barcoding in ecology is not completely novel, and there have been early adopters of this technology. For example, the Cedar Creek Long Term Ecological Research (LTER) site has been using barcodes since at least the mid‐1990s to track the large number of samples collected in their long‐term experimental grasslands (T. A. Kennedy, personal observation ). Overall, however, Cedar Creek is an outlier: in informal e‐mail surveys of LTER sites, only two of eight respondents used barcodes for sample identification or tracking, and even then their use was generally limited to certain samples or certain stages of sample analysis. Our objective in this article is to use our lab as a case study to highlight the potential of barcodes to simplify numerous aspects of sample collection and processing.

Arizona