Geology topics

James M. Watkins

Publications and source records attributed to James M. Watkins.

At least 19 recordsLinked to original sources

USGS2026

Availability of dark daytime refuge may limit mysid abundance in the Laurentian Great Lakes

The zooplankton Mysis diluviana is a major component of the Laurentian Great Lakes food web and has recently declined in abundance in both lakes Michigan and Huron. Drivers of these declines are not well understood. Here, we explore the hypothesis that recent increases in water clarity have contributed to the decline of M. diluviana (mysids) by limiting the availability of daytime dark refuge from visual predators. Using Secchi depth data from 1996 to 2021, we estimate that dark refuge has decreased substantially in lakes Michigan and Huron where mysids have declined, but dark refuge has remained more stable in lakes Ontario and Superior where mysid populations did not decline. Results from a 2021 uncrewed surface vessel hydroacoustic survey and lake-wide, net-based sampling in lakes Michigan and Huron revealed significantly more mysids in areas with dark refuge, such as Lake Michigan’s northern basin. Conversely, Lake Huron contains sparse dark refuge consistent with low mysid densities in that lake. Higher water clarity leading to increased predation may be a primary driver of mysid declines in the Great Lakes.

Laurentian Great Lakes↗

USGS2026

Evaluating the use of uncrewed surface vessels to enhance Lake Erie acoustic prey-fish surveys

Incorporation of autonomous uncrewed surface vessels (USVs) into large-scale acoustic surveys may enhance spatiotemporal extent and quality of fish density estimates. Lake Erie is currently surveyed by three motorized research vessels (RVs), which annually collect acoustic data and estimate prey-fish abundances. To evaluate the feasibility of incorporating a USV into the existing survey to increase spatial coverage, we compared paired acoustic measurements of target strength (TS), area backscattering coefficient (ABC), and areal fish density from four motorized RVs (three currently and one historically used) and one USV (Saildrone Explorer). Acoustic data were collected along 2-km transects during five sampling events distributed throughout Lake Erie. Despite observing event-specific differences that were likely impacted by sampling conditions, survey-level estimates of areal density between RVs and the USV were comparable (i.e., RV 6% lower than USV). RVs and the USV appear to react differently (speed and stability) to variable environmental conditions (wind and waves), which impacted data quality and must be mitigated in future applications. However, similar to previous comparisons in marine and freshwater environments, incorporating a USV into an acoustic survey could enhance annual fish density estimates by increasing effort, spatial coverage, logistical flexibility, and biological data collection opportunities from RVs.

Michigan, New York, Ohio, Pennsylvania↗

USGS2025

Lake depth and light conditions alter Mysis vertical distributions

Light regulates the vertical migration of many aquatic organisms. Mysis species couple pelagic and benthic habitats in lakes by diel vertical migrations (DVM), transporting energy and nutrients through the water column and food web. Although Mysis are generally assumed to remain on the bottom during the day, some have been observed in the pelagic zone during the day, indicating incomplete benthic-pelagic coupling in some systems. The degree to which light attenuation and lake depth interact to affect occurrence of mysids within the water column during the day is understudied. We used standardized Mysis net sampling in summers 2020 and 2021 across nine north-temperate lakes to test the hypotheses that 1) Mysis remain pelagic during the day at depths with sufficiently low light levels, and 2) pelagic-caught individuals during the day are, on average, smaller than those caught at night. To test these hypotheses, we assessed light, dissolved oxygen (DO), Mysis densities, and size distribution between night and day across bathymetric depths. In deep lakes and darkly colored shallow lakes, Mysis suspended in the water column during the day where light levels decreased to their light avoidance threshold (∼10 -5 to 10 -6 lx ). Mysis suspended in the water column during the day were smaller than those collected at night. Further, Mysis were not captured when DO reached levels < 3 mg/L, regardless of light conditions. Our results suggest that benthic-pelagic coupling by Mysis is mediated through light conditions, lake morphometry, and DO conditions, and may include some degree of size-dependent behavior.

Journal of Great Lakes Research↗

USGS2024

Ecology of Lake Erie - Chemistry, plankton & planktivory: A synthesis

As with other large lake ecosystems worldwide, Lake Erie can be considered a moving target for management, owing to physicochemical and biological changes brought on by anthropogenic change, both planned (e.g. nutrient and fisheries management) and unplanned (e.g. climate change, invasive species, modified land-use activities). These changes have challenged efforts to conserve biodiversity, sustain exploitable resources, and maintain the integrity of services valued by society both within the Lake Erie basin and (Fraker et al., 2022; Fussell et al., 2016; Sinclair et al., 2021; Sinclair et al., 2023) and outside of it (Allan et al., 2013; Jenny et al., 2020; Sterner et al., 2017). Some of these changes and their ramifications for management were documented in the first of four AEHM special issues devoted to the Lake Erie ecosystem (the fourth issue of 2023, volume 26, issue 4; see overview by Ludsin et al., 2023). That special issue focused explicitly on nutrient inputs and availability in Lake Erie and the lower food web, including planktonic and benthic microbial (including cyanobacteria), algal, and invasive dreissenid mussel communities. Similar to the previous Lake Erie special issue, this second one has focused on documenting the state of the lake, providing ecological understanding that could potentially benefit management. While some overlap in topics exists between issues, the studies conducted herein were completely independent of those previous investigations and offer unique insights. Specifically, the contributions to this current issue center on: 1) dynamics of water chemistry in Lake Erie’s central basin (i.e. bottom hypoxia; Ackerman et al., 2024) and western basin (i.e. mercury; Starr et al., 2024); 2) changes in primary producer biomass (Lesht et al., 2024), cyanotoxins (i.e. microcystin; Zastepa et al., 2024), and water quality (e.g. water clarity and dissolved nutrients; Howell et al., 2024); and 3) larval fish foraging (i.e. Lake Whitefish; Coregonus clupeaformis; Amidon et al., 2024) and community structure and phenology (DeBruyne et al., 2024). Below we summarize the major findings of these papers and offer a synthetic perspective on the value of this research for understanding the state of Lake Erie and enhancing management.

Aquatic Ecosystem Health and Management↗

USGS2024

Broad scale community-level larval fish survey of southern Lake Erie

The early-life history stages of fish are sensitive to environmental change and therefore can indicate habitat quality as well as help predict recruitment of resident and transient fishes. In 2019, as part of the Lake Erie Cooperative Science and Monitoring Initiative, we conducted a lake-wide assessment of the ichthyoplankton community in U.S. nearshore waters and international offshore waters. The goal of this work was to characterize the larval fish community across the lake and assess species composition, phenology, and distribution of larvae. Ichthyoplankton were sampled weekly using bongo nets at ports beginning at the Detroit River and along the southern shore of Lake Erie to Dunkirk, NY, and less frequently in the Niagara River and offshore areas. Larval fish were present from March 26 through August 29, 2019. The first taxon to emerge was Lake Whitefish in all basins, followed by Walleye, Yellow Perch, and catostomids, depending on port. Mean total density peaked in mid-June due to high catches of Gizzard Shad, Morone spp., and Freshwater Drum in the western basin. Few fish were collected in the offshore sites. Taxa richness, diversity, and larval density were higher in the western basin and lower in the central and eastern basins, generally following the productivity gradient. This was the first study to provide a comprehensive community assessment of the ichthyoplankton community of Lake Erie and can provide a baseline to assess future change, especially in community composition or phenology, of larvae which are likely to respond to climate and habitat change.

Lake Erie↗

USGS2024

Paired comparisons with quiet surface drones show evidence of fish behavioral response to motorized vessels during acoustic surveys in Lake Superior

Acoustic surveys are important for fish stock assessments, but fish responses to survey vessels can bias acoustic estimates. We leveraged quiet uncrewed surface vessels (USVs) to characterize potential bias in acoustic surveys. Five conventional motorized ships overtook USVs from astern over 2 km transects at night in Lake Superior in 2022. We examined the difference in acoustic backscatter, average target depth, and average target strength (TS) between USV and motorized vessels. Although sound level measurements from the motorized vessels sometimes exceeded recommendations for scientific vessels, we did not detect differences in acoustic measures among survey vessels. However, the USVs recorded 2 dB higher acoustic backscatter and TS than motorized vessels, leading to ~15% higher fish densities with drones when using in situ TS and echo integration. Differences in fish density would increase to 30-60% if a standard TS value was applied. Target depth did not differ between USVs and motorized ships. These results are consistent with a change in orientation but not depth of insonified fish and limited horizontal avoidance of motorized survey vessels.

Lake Superior↗

USGS2023

Lake Ontario’s nearshore zooplankton: Community composition changes and comparisons to the offshore

In large lake systems the nearshore habitat is an intermediate zone between the shoreline and offshore, is an important nursery for larval fish, and is highlighted as an area in need of research in the Laurentian Great Lakes. In this study, we used two long-term monitoring programs to characterize the nearshore zooplankton community composition using seasonal data (May – October) and to compare the nearshore and offshore zooplankton community composition changes over time (1998 – 2019) to determine if the changes were synchronized. In the nearshore, we found the highest zooplankton biomass during the late summer/early fall (August 27th – Oct 6th), compared to mid-summer (July 1st – Aug 26th) and late spring (May 20th – June 30th). In the summer, the nearshore zooplankton community was dominated by cladocerans while copepods dominated the offshore community. From 1998 to 2019, both nearshore and offshore copepods shifted from a cyclopoid to a calanoid-dominated state, but the details of this change were different. For example, taxon-specific analysis revealed that despite reduced cyclopoids in both habitats, Mesocyclops edax increased in the nearshore. Additionally, taxon-specific analysis suggested the changes occurred an average of three years earlier in the nearshore. Using Analysis of Similarity, the nearshore and offshore summer zooplankton community compositions became increasingly distinct over time. Results from this study highlight the uniqueness of the nearshore in large lake systems, the importance of seasonal and long-term monitoring, and the potential of the nearshore as an early indicator of offshore changes.

Lake Ontario↗

USGS2022

Hydrogen isotope behavior during rhyolite glass hydration under hydrothermal conditions

The diffusion of molecular water (H 2 O m ) from the environment into volcanic glass can hydrate the glass up to several wt% at low temperature over long timescales. During this process, the water imprints its hydrogen isotope composition (δD H2O ) to the glass (δD gl ) offset by a glass-H 2 O fractionation factor (ΔD gl-H2O = δD gl – δD H2O ) which is approximately −33‰ at Earth surface temperatures. Glasses hydrate much more rapidly at higher, sub-magmatic temperatures as they interact with H 2 O during eruption, transport, and emplacement. To aid in the interpretation of δD gl in natural samples, we present hydrogen isotope results from vapor hydration experiments conducted at 175–375 °C for durations of hours to months using natural volcanic glasses. The results can be divided into two thermal regimes: above 250 °C and below 250 °C. Lower temperature experiments yield raw ΔD gl-H2O values in the range of −33 ± 11‰. Experiments at 225 °C using both positive and negative initial ΔD gl-H2O values converge on this range of values, suggesting this range represents the approximate equilibrium fractionation for H isotopes between glass and H 2 O vapor (10 3 lnα gl-H2O ) below 250 °C. Variation in ΔD gl-H2O (−33 ± 11‰) between different experiments and glasses may arise from incomplete hydration, analytical uncertainty, differences in glass chemistry, and/or subordinate kinetic isotope effects. Experiments above 250 °C yield unexpectedly low δD gl values with ΔD gl-H2O values of ≤–85‰. While alteration alone is incapable of explaining the data, these run products have more extensive surface alteration and are not interpreted to reflect equilibrium fractionation between glass and H 2 O vapor. Fourier transform infrared spectroscopy (FTIR) shows that glass can hydrate with as much as 5.9 wt% H 2 O m and 1.0 wt% hydroxl (OH − ) in the highest P-T experiment at 375 °C and 21.1 MPa. Therefore, we employ a 1D isotope diffusion–reaction model of glass hydration to evaluate the roles of equilibrium fractionation, isotope diffusion, water speciation reactions internal to the glass, and changing boundary conditions (e.g. alteration and dissolution). At lower temperatures, the best fitting model results to experimental data for low silica rhyolite (LSR) glasses require only an equilibrium fractionation factor and yield 10 3 lnα gl-H2O values of −33‰ ± 5‰ and −25‰ ± 5‰ at 175 °C and 225 °C, respectively. At higher temperatures, ΔD gl-H2O is dominated by boundary layer effects during glass hydration and glass surface alteration. The modeled bulk δD gl value is highly responsive to changes in the δD gl boundary condition regardless of the magnitude of other kinetic effects. Observed glass dissolution and surficial secondary mineral formation are likely to impose a disequilibrium boundary layer that drives extreme δD gl fractionation with progressive glass hydration. These results indicate that the observed ΔD gl-H2O of ∼−33 ± 11‰ can be cautiously applied as an equilibrium 10 3 lnα gl-H2O value to natural silicic glasses hydrated below 250 °C to identify hydration sources. This approximate ΔD gl-H2O may be applicable to even higher temperature glasses hydrated on short timescales (of seconds to minutes) in phreatomagmatic or submarine eruptions before H 2 O in the glass is primarily affected by boundary layer effects associated with alteration on the glass surface.

Geochimica et Cosmochimica Acta↗

USGS2022

Importance of nonindigenous harpacticoids (Crustacea: Copepoda) decrease with depth in Lake Ontario

Harpacticoid copepods can be a substantial component of the meiobenthic community in lakes and serve an ecological role as detritivores. Here we present the first species-level lake-wide quantitative assessment of the harpacticoid assemblage of Lake Ontario with emphasis on the status of nonindigenous species. Additionally, we provide COI-5P sequences of harpacticoid taxa through Barcode of Life Data System (BOLD). Harpacticoids were collected at depths from 0.1 to 184 m and from a range of substrates from August to September 2018 as part of the Cooperative Science and Monitoring Initiative (CSMI) offshore benthic survey. Twenty-six meiobenthic samples were analyzed using microscopy for community composition analysis of harpacticoids. We found thirteen indigenous and three nonindigenous species of harpacticoid, with the introduced species dominating at shallow depths. The community transitioned from nonindigenous to indigenous species dominance as depth increased. Nonindigenous species accounted for 79% of the community (by abundance) at depths <20 m, 55% from 20 to 40 m, and only 24% at depths >40 m. The nonindigenous species encountered included the first detections of Schizopera borutzkyi (Monchenko, 1967) and Heteropsyllus nunni (Coull, 1975) from Lake Ontario. S. borutzkyi was the most abundant harpacticoid species in the lake, approaching a maximum density of 50,000/m 2 and a lake-wide average density of 7,900/m 2 . Numerically important indigenous species included Bryocamptus nivalis (Willey, 1925), Canthocamptus robertcokeri (Wilson, 1958), Canthocamptus staphylinoides (Pearse, 1905), and Moraria cristata (Chappuis, 1929). The prevalence of nonindigenous harpacticoids in the meiobenthos of Lake Ontario suggests further investigations of Great Lakes meiofauna communities are warranted.

Lake Ontario↗

USGS2021

The products of primary magma fragmentation finally revealed by pumice agglomerates

Following rapid decompression in the conduit of a volcano, magma breaks into ash- to block-sized fragments, powering explosive sub-Plinian and Plinian eruptions that may generate destructive pyroclastic falls and flows. It is thus crucial to assess how magma breaks up into fragments. This task is difficult, however, because of the subterranean nature of the entire process and because the original size of pristine fragments is modified by secondary fragmentation and expansion. New textural observations of sub-Plinian and Plinian pumice lapilli reveal that some primary products of magma fragmentation survive by sintering together within seconds of magma break-up. Their size distributions reflect the energetics of fragmentation, consistent with products of rapid decompression experiments. Pumice aggregates thus offer a unique window into the previously inaccessible primary fragmentation process and could be used to determine the potential energy of fragmentation.

Geology↗

USGS2021

Lake-wide annual status of Mysis diluviana population in Lake Michigan in 2015

Mysis diluviana is one of the most abundant zooplankton by biomass in the Laurentian Great Lakes of North America, a predator of other zooplankton and an important prey for fishes. Studies of long-term trends in Lake Michigan have shown 2005–2016 densities to be 50–80% lower than 1990s densities, but these observations have been based on annual monitoring that is either spatially or seasonally limited. We combined Lake Michigan Mysis data from three annual programs and the 2015 Cooperative Science and Monitoring Initiative to achieve broad spatial coverage during spring, summer, and fall of 2015 and broad depth coverage during spring 2016. Lake-wide, annual density and biomass were 82 (SE: 10) Mysis /m 2 and 200 (SE: 36) mg dry mass/m 2 . Density and biomass estimates were highest offshore, generally higher in the north basin, and seasonally highest in summer. Annual lake-wide averages for depths >30 m were better captured by seasonally-extensive annual programs than spatially-extensive annual programs, although spring sampling may bias annual values low. Mysis cohorts grew 0.026 mm/d (age-0) and 0.007 to 0.027 mm/d (age-1). Annual mortality was 81–98%. Reproduction was fall-spring and seasonal lake-wide estimates ranged from 0.6 to 19.1% females brooding, 13–20 embryos/brood, and 3–46 embryos/m 2 . Annual production (423 mg dry mass/m 2 /yr, SE: 31) was lower than all but one previous estimate from lakes Michigan, Huron, and Ontario. While Mysis tend to persist, low Mysis production may be a concern for prey fishes that feed on Mysis .

Lake Michigan↗

USGS2019

Status of Mysis diluviana in Lake Ontario in 2013: lower abundance but higher fecundity than in the 1990s

Mysis diluviana is a major component of prey fish diets in the Great Lakes, so annual production of M. diluviana is important for understanding and modeling energy flow through Great Lakes food webs. However, only three lake-wide measurements of M. diluviana annual production in Lake Ontario are currently available (1971, 1990, 1995). During 2013, lake-wide coverage of Lake Ontario was achieved during four periods from April to November. Annual mean density and biomass of M. diluviana in 2013 were 99 #/m 2 (SE: 8) and 318 mg dw/m 2 (SE: 28) – approximately half of values observed in 1990s. M. diluviana comprised 13–30% of offshore zooplankton biomass in each period. Reproduction peaked in fall, with mean brood size of 32 embryos (range: 11–49), at least 10% larger than in 1990s. Generation time was two years from embryo to initial reproduction. Growth rates were 0.052 mm/d for the age-0 cohort and 0.027 mm/d for the age-1 cohort. Age-0 growth rate was significantly higher than in 1980s–90s (0.035 mm/d). Annual production in 2013 was 0.85 g dw/m 2 /yr (SE: 0.03) which was 30–40% of values observed in 1990 and 1995 (2.23 and 2.53 g/m 2 /yr). Annual production to biomass ratio (P/B) in 2013 was 2.65 /yr which was 80–85% of values observed in 1990 and 1995 (3.24 and 3.11 /yr), but this difference was not statistically significant. Our results suggest that changes in annual production over time can be estimated using changes in biomass over time and a mean P/B ratio.

Lake Ontario↗

USGS2017

Effects of food web changes on Mysis diluviana diet in Lake Ontario

Mysids are important benthic-pelagic omnivores in many deep-lake food webs, yet quantitative data on their diet are limited. We explored the trophic role of Mysis diluviana in offshore Lake Ontario using samples collected in May, July, and September 2013 with a focus on seasonal and ontogenetic patterns in herbivory and zooplanktivory using two approaches. We hypothesized that Mysis diet in 2013 differs from the last investigation in 1995 in response to changes in pelagic prey over 1995 to 2013. Gut fluorescence indicated high grazing by adult and juvenile Mysis in May 2013. In July, smaller mysids were more herbivorous than larger individuals, a pattern that was less pronounced in September. Microscopic gut analysis showed copepods, including Limnocalanus , were common in diets of both size groups in May. In July, mainly cladocerans were consumed, including Cercopagis pengoi which represents a change from a past investigation that preceded Cercopagis invasion in the lake. Our results are consistent with earlier observations of a larger proportion of algae in mysid diets in spring, transitioning to relatively more zooplanktivory and use of cladocerans in the summer and fall. Higher chlorophyll content in small mysids in July than in September may be associated with the presence of a deep chlorophyll layer in July that had largely dissipated by September. Overall, Mysis in Lake Ontario continues to be a generalist omnivore, incorporating new prey items and exhibiting higher herbivory in spring.

Lake Ontario↗

USGS2017

Concentration and biochemical gradients of seston in Lake Ontario

Spatial variability in resource quantity and quality may have important implications for the distribution and productivity of primary consumers. In Lake Ontario, ecosystem characteristics suggest the potential for significant spatial heterogeneity in seston quantity and quality, particularly due to the potential for nearshore-offshore gradients in allochthonous nutrient supply, and the formation of a deep chlorophyll layer (DCL) in July. We assessed total and zooplankton food particle size-fractionated chlorophyll a concentrations, as well as carbon-to-phosphorus stoichiometry and essential fatty acid composition of seston across a distance-from-shore and depth transect. We observed time, sampling depth, and distance from shore to be the best predictors of chlorophyll a concentration. Resource quality was much more homogenous in space, but there were strong patterns through time, as both stoichiometric and fatty acid qualities in general were greatest in May, and lowest in July/August. We did observe a peak in essential fatty acid concentration near the DCL in during time of formation, possibly due to differences in phytoplankton community composition between the DCL and epilimnion. These results suggest the potential for a spatially and temporally dynamic resource base for consumers in Lake Ontario, which may be important in developing a broader understanding of variable consumer productivity.

Lake Ontario↗

USGS2017

Simulation of rapid ecological change in Lake Ontario

Lower trophic level processes are integral to proper functioning of large aquatic ecosystems and have been disturbed in Lake Ontario by various stressors including exotic species. The invasion of benthic habitats by dreissenid mussels has led to systemic changes and native faunal declines. Size-dependent physiological rates, spatial differences and connectivity, competition, and differential population dynamics among invertebrate groups contributed to the change and system complexity. We developed a spatially explicit, individual-based mechanistic model of the benthic ecosystem in Lake Ontario, with coupling to the pelagic system, to examine ecosystem dynamics and effects of dreissenid mussel invasion and native fauna losses. Benthic organisms were represented by functional groups; filter-feeders (i.e., dreissenid mussels), surface deposit-feeders (e.g., native amphipod Diporeia spp.), and deposit-feeders (e.g., oligochaetes and other burrowers). The model was stable, represented ecological structure and function effectively, and reproduced observed effects of the mussel invasion. Two hypotheses for causes of Diporeia loss, competition or disease-like mortality, were tested. Simple competition for food did not explain observed declines in native surface deposit-feeders during the filter-feeder invasion. However, the elevated mortality scenario supports a disease-like cause for loss of the native amphipod, with population changes in various lake areas and altered benthic biomass transfers. Stabilization of mussel populations and possible recovery of the native, surface-deposit feeding amphipod were predicted. Although further research is required on forcing functions, model parameters, and natural conditions, the model provides a valuable tool to help managers understand the benthic system and plan for response to future disruptions.

Lake Ontario↗

USGS2017

The deep chlorophyll layer in Lake Ontario: Extent, mechanisms of formation, and abiotic predictors

Epilimnetic production has declined in Lake Ontario, but increased production in metalimnetic deep chlorophyll layers (DCLs) may compensate for these losses. We investigated the spatial and temporal extent of DCLs, the mechanisms driving DCL formation, and the use of physical variables for predicting the depth and concentration of the deep chlorophyll maximum (DCM) during April–September 2013. A DCL with DCM concentrations 2 to 3 times greater than those in the epilimnion was present when the euphotic depth extended below the epilimnion, which occurred primarily from late June through mid-August. In situ growth was important for DCL formation in June and July, but settling and photoadaptation likely also contributed to the later-season DCL. Supporting evidence includes: phytoplankton biovolume was 2.4 × greater in the DCL than in the epilimnion during July, the DCL phytoplankton community of July was different from that of May and the July epilimnion ( p = 0.004), and there were concurrences of DCM with maxima in fine particle concentration and dissolved oxygen saturation. Higher nutrient levels in the metalimnion may also be a necessary condition for DCL formation because July metalimnetic concentrations were 1.5 × (nitrate) and 3.5 × (silica) greater than in the epilimnion. Thermal structure variables including epilimnion depth, thermocline depth, and thermocline steepness were useful for predicting DCM depth; the inclusion of euphotic depth only marginally improved these predictions. However, euphotic depth was critical for predicting DCM concentrations. The DCL is a productive and predictable feature of the Lake Ontario ecosystem during the stratified period.

Lake Ontario↗

USGS2017

Cooperative science to inform Lake Ontario management: Research from the 2013 Lake Ontario CSMI program

Since the mid-1970s, successful Lake Ontario management actions including nutrient load and pollution reductions, habitat restoration, and fish stocking have improved Lake Ontario. However, several new obstacles to maintenance and restoration have emerged. This special issue presents management-relevant research from multiple agency surveys in 2011 and 2012 and the 2013 Cooperative Science and Monitoring Initiative (CSMI), that span diverse lake habitats, species, and trophic levels. This research focused on themes of nutrient loading and fate; vertical dynamics of primary and secondary production; fish abundance and behavior; and food web structure. Together these papers identify the status of many of the key drivers of the Lake Ontario ecosystem and contribute to addressing lake-scale questions and management information needs in Lake Ontario and the other Great Lakes and connecting water bodies.

Lake Ontario↗

USGS2017

Nutrients, phytoplankton, zooplankton, and macrobenthos

Lower trophic levels support the prey fish on which most sport fish depend. Therefore, understanding the production potential of lower trophic levels is integral to the management of Lake Ontario’s fishery resources. Lower trophic-level productivity differs among offshore and nearshore waters. In the offshore, there is concern about the ability of the lake to support Alewife (Table 1) production due to a perceived decline in productivity of phytoplankton and zooplankton whereas, in the nearshore, there is a concern about excessive attached algal production (e.g., Cladophora) associated with higher nutrient concentrations—the oligotrophication of the offshore and the eutrophication of the nearshore (Mills et al. 2003; Holeck et al. 2008; Dove 2009; Koops et al. 2015; Stewart et al. 2016). Even though the collapse of the Alewife population in Lake Huron in 2003 (and the associated decline in the Chinook Salmon fishery) may have been precipitated by a cold winter (Dunlop and Riley 2013), Alewife had not returned to high abundances in Lake Huron as of 2014 (Roseman et al. 2015). Failure of the Alewife population to recover from collapse has been attributed to declines in lower trophic-level production (Barbiero et al. 2011; Bunnell et al. 2014; but see He et al. 2015). In Lake Michigan, concerns of a similar Alewife collapse led to a decrease in the number of Chinook Salmon stocked. If lower trophic-level production declines in Lake Ontario, a similar management action could be considered. On the other hand, in Lake Erie, which supplies most of the water in Lake Ontario, eutrophication is increasing and so are harmful algal blooms. Thus, there is also a concern that nutrient levels and algal blooms could increase in Lake Ontario, especially in the nearshore. Solutions to the two processes of concern—eutrophication in the nearshore and oligotrophication in the offshore—may be mutually exclusive. In either circumstance, fisheries management needs information on the productivity of lower trophic levels in Lake Ontario. In this chapter, we review the status of lower trophic levels in Lake Ontario with special attention to the current (2008-2013) and previous (2003-2007) reporting periods. During the two reporting periods, three whole-lake surveys of lower trophic levels were conducted: the Lower Trophic Level Assessment (LOLA) in 2003 and 2008 (Makarewicz and Howell 2012; Munawar et al. 2015b) and the Cooperative Science and Management Initiative (CSMI) in 2013. Analyses of the CSMI data are ongoing. In addition to the three one-year sources of information on lower trophic levels, several multi-year sources of information are available, including data from the surveillance program conducted since 1965 by Environment Canada (EC) (Dove 2009), monitoring conducted since 1980 by the U.S. Environmental Protection Agency’s (EPA) Great Lakes National Program Office (GLNPO) (Barbiero et al. 2014; Reavie et al. 2014), sampling for a Bioindex Program at two stations, one offshore and one in the Eastern Basin, assessments of Mysis diluviana (formerly Mysis relicta) conducted since 1980 by Fisheries and Oceans Canada (Johannsson et al. 1998, 2011) and the Ontario Ministry of Natural Resources and Forestry (OMNRF), and monitoring conducted since 1995 by the Biomonitoring Program (BMP) on the New York side of the lake (Holeck et al. 2015b). The BMP is a collaboration of the New York State Department of Environmental Conservation (DEC), U.S. Fish and Wildlife Service, U.S. Geological Survey (USGS), and Cornell University.

Special Publication↗