USGS Science⌕ Search

Geology topics

Hilary A. Neckles

Publications and source records attributed to Hilary A. Neckles.

33 records · Page 2Linked to original sources
USGS2014

Use of structured decision making to identify monitoring variables and management priorities for salt marsh ecosystems

Most salt marshes in the USA have been degraded by human activities, and coastal managers are faced with complex choices among possible actions to restore or enhance ecosystem integrity. We applied structured decision making (SDM) to guide selection of monitoring variables and management priorities for salt marshes within the National Wildlife Refuge System in the northeastern USA. In general, SDM is a systematic process for decomposing a decision into its essential elements. We first engaged stakeholders in clarifying regional salt marsh decision problems, defining objectives and attributes to evaluate whether objectives are achieved, and developing a pool of alternative management actions for achieving objectives. Through this process, we identified salt marsh attributes that were applicable to monitoring National Wildlife Refuges on a regional scale and that targeted management needs. We then analyzed management decisions within three salt marsh units at Prime Hook National Wildlife Refuge, coastal Delaware, as a case example of prioritizing management alternatives. Values for salt marsh attributes were estimated from 2 years of baseline monitoring data and expert opinion. We used linear value modeling to aggregate multiple attributes into a single performance score for each alternative, constrained optimization to identify alternatives that maximized total management benefits subject to refuge-wide cost constraints, and used graphical analysis to identify the optimal set of alternatives for the refuge. SDM offers an efficient, transparent approach for integrating monitoring into management practice and improving the quality of management decisions.

Estuaries and Coasts↗
USGS2013

Priority data on marine and estuarine resources within northeastern National Parks: Inventory and acquisition needs

The purpose of this project was to guide development of a strategy for the inventory and mapping of submerged natural resources associated within 10 coastal parks of the National Park Service (NPS) Northeast Region (NER; see Table 1). Priority data needs were identified by the NER Ocean Stewardship Task Force. The majority of the NER priority data needs involve the biotic, chemical, and geological characterization of the seabed. Taken collectively, this demands a consistent and unified approach to habitat classification. The Coastal and Marine Ecological Classification Standard (CMECS) is endorsed by the Federal Geographic Data Committee (FGDC-STD-018) for classifying ecological units in coastal and marine environments, and is recommended as a framework for acquiring and organizing NER data. We prepared an inventory of existing data on priority marine and estuarine natural resources within the ten NER coastal parks. This report describes the data and information sources relevant to each park and identifies gaps in available data. Overwhelmingly and uniformly across all parks, the most pressing needs are consistent, high-resolution bathymetry and seafloor characterization data. Approaches for acquiring these data using an integrated, multi-resolution sampling framework are recommended.

Natural Resource Report↗
USGS2013

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗
USGS2011

Integrating scales of seagrass monitoring to meet conservation needs

We evaluated a hierarchical framework for seagrass monitoring in two estuaries in the northeastern USA: Little Pleasant Bay, Massachusetts, and Great South Bay/Moriches Bay, New York. This approach includes three tiers of monitoring that are integrated across spatial scales and sampling intensities. We identified monitoring attributes for determining attainment of conservation objectives to protect seagrass ecosystems from estuarine nutrient enrichment. Existing mapping programs provided large-scale information on seagrass distribution and bed sizes (tier 1 monitoring). We supplemented this with bay-wide, quadrat-based assessments of seagrass percent cover and canopy height at permanent sampling stations following a spatially distributed random design (tier 2 monitoring). Resampling simulations showed that four observations per station were sufficient to minimize bias in estimating mean percent cover on a bay-wide scale, and sample sizes of 55 stations in a 624-ha system and 198 stations in a 9,220-ha system were sufficient to detect absolute temporal increases in seagrass abundance from 25% to 49% cover and from 4% to 12% cover, respectively. We made high-resolution measurements of seagrass condition (percent cover, canopy height, total and reproductive shoot density, biomass, and seagrass depth limit) at a representative index site in each system (tier 3 monitoring). Tier 3 data helped explain system-wide changes. Our results suggest tiered monitoring as an efficient and feasible way to detect and predict changes in seagrass systems relative to multi-scale conservation objectives.

Massachusetts↗
USGS2009

Estuarine water quality in parks of the Northeast Coastal and Barrier Network: Development and early implementation of vital signs estuarine nutrient-enrichment monitoring, 2003-06

This report documents results of pilot tests of a protocol for monitoring estuarine nutrient enrichment for the Vital Signs Monitoring Program of the National Park Service Northeast Coastal and Barrier Network. Data collected from four parks during protocol development in 2003-06 are presented: Gateway National Recreation Area, Colonial National Historic Park, Fire Island National Seashore, and Assateague Island National Seashore. The monitoring approach incorporates several spatial and temporal designs to address questions at a hierarchy of scales. Indicators of estuarine response to nutrient enrichment were sampled using a probability design within park estuaries during a late-summer index period. Monitoring variables consisted of dissolved-oxygen concentration, chlorophyll a concentration, water temperature, salinity, attenuation of downwelling photosynthetically available radiation (PAR), and turbidity. The statistical sampling design allowed the condition of unsampled locations to be inferred from the distribution of data from a set of randomly positioned "probability" stations. A subset of sampling stations was sampled repeatedly during the index period, and stations were not rerandomized in subsequent years. These "trend stations" allowed us to examine temporal variability within the index period, and to improve the sensitivity of the monitoring protocol to detecting change through time. Additionally, one index site in each park was equipped for continuous monitoring throughout the index period. Thus, the protocol includes elements of probabilistic and targeted spatial sampling, and the temporal intensity ranges from snapshot assessments to continuous monitoring.

Natural Resource Technical Report↗
USGS2005

Negative effects of commercial mussel dragging on eelgrass beds in Maine

A study by the US Geological Survey, the University of New Hampshire, and the Maine Department of Marine Resources showed that commercial mussel dragging poses a severe and long-lasting threat to eelgrass (Zostera marina). Dragging can damage large areas, with individual drag scars up to 79 acres in size found in Maine eelgrass beds. Dragging activity uproots eelgrass plants completely, removing leaves, rhizomes, and roots. Two independent methods were used to predict the rate of eelgrass recovery in heavily dragged areas. Under the best environmental conditions, complete revegetation of a dragged area would require an average of 11 years. Under conditions less favorable for eelgrass growth, such as reduced water quality, dragged areas could require more than 20 years to recover. Protection of eelgrass from commercial shellfish dragging will preserve important coastal habitat.

Maine↗
USGS2005

Using hydrogeomorphic criteria to classify wetlands on Mt. Desert Island, Maine – Approach, classification system, and examples

A wetland classification system was designed for Mt. Desert Island, Maine, to help categorize the large number of wetlands (over 1,200 mapped units) as an aid to understanding their hydrologic functions. The classification system, developed by the U.S. Geological Survey (USGS), in cooperation with the National Park Service, uses a modified hydrogeomorphic (HGM) approach, and assigns categories based on position in the landscape, soils and surficial geologic setting, and source of water. A dichotomous key was developed to determine a preliminary HGM classification of wetlands on the island. This key is designed for use with USGS topographic maps and 1:24,000 geographic information system (GIS) coverages as an aid to the classification, but may also be used with field data. Hydrologic data collected from a wetland monitoring study were used to determine whether the preliminary classification of individual wetlands using the HGM approach yielded classes that were consistent with actual hydroperiod data. Preliminary HGM classifications of the 20 wetlands in the monitoring study were consistent with the field hydroperiod data. The modified HGM classification approach appears robust, although the method apparently works somewhat better with undisturbed wetlands than with disturbed wetlands. This wetland classification system could be applied to other hydrogeologically similar areas of northern New England.

Maine↗
USGS2005

Disturbance of eelgrass Zostera marina by commercial mussel Mytilus edulis harvesting in Maine: Dragging impacts and habitat recovery

We studied the effects of commercial harvest of blue mussels Mytilus edulis on eelgrass Zostera marina L. in Maquoit Bay, Maine, USA, at a hierarchy of scales. We used aerial photography, underwater video, and eelgrass population- and shoot-based measurements to quantify dragging impacts within 4 sites that had been disturbed at different times over an approximate 7 yr interval, and to project eelgrass meadow recovery rates. Dragging had disturbed 10% of the eelgrass cover in Maquoit Bay, with dragged sites ranging from 3.4 to 31.8 ha in size. Dragging removed above- and belowground plant material from the majority of the bottom in the disturbed sites. One year following dragging, eelgrass shoot density, shoot height and total biomass of disturbed sites averaged respectively 2 to 3%, 46 to 61% and <1% that of the reference sites. Substantial differences in eelgrass biomass persisted between disturbed and reference sites up to 7 yr after dragging. Dragging did not affect physical characteristics of the sediment. The pattern and rate of eelgrass bed recovery depended strongly on initial dragging intensity; areas of relatively light dragging with many remnant eelgrass patches (i.e. patches that were missed by the mussel dredge) showed considerable revegetation in 1 yr. However, by developing recovery trajectories from measurements at sites disturbed in different years, we projected that it would require a mean of 10.6 yr for recovery of eelgrass shoot density within the areas of intense dragging characterizing most of the disturbed sites. A spatial simulation model based on measured rates of lateral patch-expansion (mean 12.5 cm yr -1 ) and new-patch recruitment (mean 0.19 patches m -2 yr -1 ) yielded a mean bed recovery time of 9 to 11 yr following dragging, depending on initial degree of plant removal. Model simulations suggested that with favorable environmental conditions, eelgrass beds might recover from dragging disturbance in 6 yr; conversely, recovery under conditions less conducive to eelgrass growth could require 20 yr or longer. This study shows that mussel dragging poses a severe threat to eelgrass in this region and that regulations to protect eelgrass from dragging impacts would maintain the integrity of a substantial amount of habitat.

Marine Ecology Progress Series↗
USGS1999

The effects of global climate change on seagrasses

The increasing rate of global climate change seen in this century, and predicted to accelerate into the next, will significantly impact the Earth's oceans. In this review, we examine previously published seagrass research through a lens of global climate change in order to consider the potential effects on the world's seagrasses. A primary effect of increased global temperature on seagrasses will be the alteration of growth rates and other physiological functions of the plants themselves. The distribution of seagrasses will shift as a result of increased temperature stress and changes in the patterns of sexual reproduction. Indirect temperature effects may include plant community changes as a result of increased eutrophication and changes in the frequency and intensity of extreme weather events. The direct effects of sea level rise on the coastal oceans will be to increase water depths, change tidal variation (both mean tide level and tidal prism), alter water movement, and increase seawater intrusion into estuaries and rivers. A major impact of all these changes on seagrasses and tidal freshwater plants will be a redistribution of existing habitats. The intrusion of ocean water into formerly fresh or brackish water areas will directly affect estuarine plant distribution by changing conditions at specific locations, causing some plants to relocate in order to stay within their tolerance zones and allowing others to expand their distribution inland. Distribution changes will result from the effects of salinity change on seed germination, propagule formation, photosynthesis, growth and biomass. Also, some plant communities may decline or be eliminated as a result of increased disease activity under more highly saline conditions. Increased water depth, which reduces the amount of light reaching existing seagrass beds, will directly reduce plant productivity where plants are light limited. Likewise, increases in water motion and tidal circulation will decrease the amount of light reaching the plants by increasing turbidity or by stimulating the growth of epiphytes. Increasing atmospheric carbon dioxide will directly elevate the amount of CO 2 in coastal waters. In areas where seagrasses are carbon limited, this may increase primary production, although whether this increase will be sustained with long-term CO 2 enrichment is uncertain. The impact of increases in CO 2 will vary with species and environmental circumstances, but will likely include species distribution by altering the competition between seagrass species as well as between seagrass and algal populations. The reaction of seagrasses to UV-B radiation may range from inhibition of photosynthetic activity, as seen for terrestrial plants and marine algae, to the increased metabolic cost of producing UV-B blocking compounds within plant tissue. The effects of UV-B radiation will likely be greatest in the tropics and in southern oceans. There is every reason to believe that, as with the predicted terrestrial effects of global climate change, impacts to seagrasses will be great. The changes that will occur in seagrass communities are difficult to predict; our assessment clearly points out the need for research directed toward the impact of global climate change on seagrasses.

Aquatic Botany↗
USGS1994

Hydrologic control of litter decomposition in seasonally flooded prairie marshes

The effect of seasonal inundation on the decomposition of emergent macrophyte litter ( Scolochloa festucacea ) was examined under experimental flooding regimes in a northern prairie marsh. Stem and leaf litter was subjected to six aboveground inundation treatments (ranging from never flooded to flooded April through October) and two belowground treatments (nonflooded and flooded April to August). Flooding increased the rate of mass loss from litter aboveground but retarded decay belowground. Aboveground, N concentration decreased and subsequently increased earlier in the longer flooded treatments, indicating that flooding decreased the time that litter remained in the leaching and immobilization phases of decay. Belowground, both flooded and nonflooded litter showed an initial rapid loss of N, but concentration and percent of original N remaining were greater in the nonflooded marsh throughout the first year. This suggested that more N was immobilized on litter under the nonflooded, more oxidizing soil conditions. Both N concentration and percent N remaining of belowground litter were greater in the flooded than the nonflooded marsh the second year, suggesting that N immobilization was enhanced after water-level drawdown. These results suggest different mechanisms by which flooding affects decomposition in different wetland environments. On the soil surface where oxygen is readily available, flooding accelerates decomposition by increasing moisture. Belowground, flooding creates anoxic conditions that slow decay. The typical hydrologic pattern in seasonally flooded prairie marshes of spring flooding followed by water-level drawdown in summer may maximize system decomposition rates by allowing rapid decomposition aboveground in standing water and by annually alleviating soil anoxia.

Manitoba↗
USGS1993

Relative effects of nutrient enrichment and grazing on epiphyte-macrophyte (Zostera marina L.) dynamics

The independent and interactive effects of nutrient concentration and epiphyte grazers on epiphyte biomass and macrophyte growth and production were examined in Zostera marina L. (eelgrass) microcosms. Experiments were conducted during early summer, late summer, fall, and spring in a greenhouse on the York River estuary of Chesapeake Bay. Nutrient treatments consisted of ambient or enriched (3× ambient) concentrations of inorganic nitrogen (ammonium nitrate) and phosphate. Grazer treatments consisted of the presence or absence of field densities of isopods, amphipods, and gastropods. epiphyte biomass increased with both grazer removal and nutrient enrichment during summer and spring experiments. The effect of grazers was stronger than that of nutrients. There was little epiphyte response to treatment during the fall, a result possibly of high ambient nutrient concentrations and low grazing pressure. Under low grazer densities of early summer, macrophyte production (g m −2 d −1 ) was reduced by grazer removal and nutrient enrichment independently. Under high grazer densities of late summer, macrophyte production was reduced by enrichment only with grazers absent. During spring and fall there were no macrophyte responses to treatment. The relative influence of epiphytes on macrophyte production may have been related to seasonally changing water temperature and macrophyte requirements for light and inorganic carbon.

Virginia↗