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Dorene E. MacCoy

Publications and source records attributed to Dorene E. MacCoy.

17 recordsLinked to original sources
USGS2018

Mercury concentrations in water and mercury and selenium concentrations in fish from Brownlee Reservoir and selected sites in the Boise and Snake Rivers, Idaho and Oregon, 2013-17

Mercury (Hg) analyses were conducted on samples of water and sport fish collected from selected sampling sites in the Boise and Snake Rivers and Brownlee Reservoir, in Idaho and Oregon, to meet National Pollution Discharge and Elimination System permit requirements for the City of Boise, Idaho, from 2013 to 2017. City of Boise personnel collected water samples from six sites in October and November of 2013, 2015 and 2017, and sampled one site in 2014 and 2016. Total Hg concentrations in unfiltered water samples ranged from 0.41 to 8.78 nanograms per liter (ng/L), with the highest value (8.78 ng/L) observed in Brownlee Reservoir in 2013. All samples were less than the U.S. Environmental Protection Agency aquatic life criterion of 12 ng/L. Individual fillets of mountain whitefish ( Prosopium williamsoni ), rainbow trout ( Oncorhynchus mykiss ), smallmouth bass ( Micropterus dolomieu ), and channel catfish ( Ictalurus punctatus ) were collected and analyzed for Hg. The tissue Hg concentrations were compared with regulatory or advisory values for wet-weight methylmercury in fish tissue. In this report, methylmercury concentrations in fish tissue are considered similar to total Hg in fish muscle tissue and are simply referred to as Hg. The 2013 average Hg concentration for smallmouth bass (0.32 mg/kg) collected at Brownlee Reservoir and for channel catfish (0.33 mg/kg) collected at the Boise River mouth, exceeded the Idaho water quality criterion (>0.3 mg/kg). The 2017 Hg concentrations in smallmouth bass from Brownlee Reservoir (geometric mean of 0.22 mg/kg) was at the Idaho Fish Consumption Advisory Program action level. Selenium (Se) interacts with Hg to reduce the health risks of Hg, such that tissues with Se-to-Hg molar ratios greater than 1 are considered to present less potential health risks for a given Hg concentration than are tissues with lower Se-to-Hg ratios. One composite fish tissue sample per site was analyzed for Se. Selenium-to-Hg molar ratios in the fish tissue samples ranged from 0.99 to 24.7.

Idaho, Oregon↗
USGS2017

Macroinvertebrate communities evaluated prior to and following a channel restoration project in Silver Creek, Blaine County, Idaho, 2001-16

The U.S. Geological Survey, in cooperation with Blaine County and The Nature Conservancy, evaluated the status of macroinvertebrate communities prior to and following a channel restoration project in Silver Creek, Blaine County, Idaho. The objective of the evaluation was to determine whether 2014 remediation efforts to restore natural channel conditions in an impounded area of Silver Creek caused declines in local macroinvertebrate communities. Starting in 2001 and ending in 2016, macroinvertebrates were sampled every 3 years at two long-term trend sites and sampled seasonally (spring, summer, and autumn) in 2013, 2015, and 2016 at seven synoptic sites. Trend-site communities were collected from natural stream-bottom substrates to represent locally established macroinvertebrate assemblages. Synoptic site communities were sampled using artificial (multi-plate) substrates to represent recently colonized (4–6 weeks) assemblages. Statistical summaries of spatial and temporal patterns in macroinvertebrate taxonomic composition at both trend and synoptic sites were completed. The potential effect of the restoration project on resident macroinvertebrate populations was determined by comparing the following community assemblage metrics: Total taxonomic richness (taxa richness); Total macroinvertebrate abundance (total abundance); Ephemeroptera, Plecoptera, Trichoptera (EPT) richness; EPT abundance; Simpson’s diversity; and Simpson’s evenness for periods prior to and following restoration. A significant decrease in one or more metric values in the period following stream channel restoration was the basis for determining impairment to the macroinvertebrate communities in Silver Creek. Comparison of pre-restoration (2001–13) and post‑restoration (2016) macroinvertebrate community composition at trend sites determined that no significant decreases occurred in any metric parameter for communities sampled in 2016. Taxa and EPT richness of colonized assemblages at synoptic sites increased significantly from pre-restoration in 2013 to post-restoration in 2015 and 2016. Similarly, total and EPT abundances at synoptic sites showed non-significant increases from 2013 to 2015 and 2016. Significant seasonal differences in macroinvertebrate assemblages were apparent at synoptic site locations and likely reflected typical life-history patterns of increased insect emergence and development in the late spring and early summer months. Taxa and EPT richness were each significantly higher in spring and summer than in autumn, and total abundances were significantly higher in spring than in summer and autumn. No significant differences in community diversity or evenness of colonized communities were noted at synoptic site locations between pre- and post-restoration years or among seasons. Select community-metric results from the trend- and synoptic ‑ site sampling indicated that the Silver Creek restoration effort in 2014 did not result in a significant decline in resident macroinvertebrate communities.

Idaho↗
USGS2017

Bull trout ( Salvelinus confluentus ) telemetry and associated habitat data collected in a geodatabase from the upper Boise River, southwestern Idaho

Bull trout ( Salvelinus confluentus ), listed as threatened under the Endangered Species Act, are among the more thermally sensitive of coldwater species in North America. The Boise River upstream of Arrowrock Dam in southwestern Idaho (including Arrowrock Reservoir) provides habitat for one of the southernmost populations of bull trout. The presence of the species in Arrowrock Reservoir poses implications for dam and reservoir operations. From 2011 to 2014, the Bureau of Reclamation and the U.S. Geological Survey collected fish telemetry data to improve understanding of bull trout distribution and movement in Arrowrock Reservoir and in the upper Boise River tributaries. The U.S. Geological Survey compiled the telemetry (fish location) data, along with reservoir elevation, river discharge, precipitation, and water-quality data in a geodatabase. The geodatabase includes metadata compliant with Federal Geographic Data Committee content standards. The Bureau of Reclamation plans to incorporate the data in a decision‑support tool for reservoir management.

Idaho↗
USGS2016

Aquatic biological communities and associated habitats at selected sites in the Big Wood River Watershed, south-central Idaho, 2014

Assessments of streamflow (discharge) parameters, water quality, physical habitat, and biological communities were completed between May and September 2014 as part of a monitoring program in the Big Wood River watershed of south-central Idaho. The sampling was conducted by the U.S. Geological Survey in cooperation with Blaine County, Trout Unlimited, the Nature Conservancy, and the Wood River Land Trust to help identify the status of aquatic resources at selected locations in the watershed. Information in this report provides a basis with which to evaluate and monitor the long-term health of the Big Wood River and its major tributaries. Sampling sites were co-located with existing U.S. Geological Survey streamgaging stations: three on the main stem Big Wood River and four on the North Fork Big Wood River (North Fork), Warm Springs Creek (Warm Sp), Trail Creek (Trail Ck), and East Fork Big Wood River (East Fork) tributaries. The analytical results and quality-assurance information for water quality, physical habitat, and biological community samples collected at study sites during 2 weeks in September 2014 are summarized. Water-quality data include concentrations of major nutrients, suspended sediment, dissolved oxygen, and fecal-coliform bacteria. To assess the potential effects of nutrient enrichment on algal growth, concentrations of periphyton biomass (chlorophyll- a and ash free dry weight) in riffle habitats were determined at each site. Physical habitat parameters include stream channel morphology, habitat volume, instream structure, substrate composition, and riparian vegetative cover. Biological data include taxa richness, abundance, and stream-health indicator metrics for macroinvertebrate and fish communities. Statistical summaries of the water-quality, habitat, and biological data are provided along with discussion of how these findings relate to the health of aquatic resources in the Big Wood River watershed. Seasonal discharge patterns using statistical summaries of daily discharge from selected sites are reported for water years 2012–15. Results showed that annual average daily mean discharge increased from the Big Wood River near Ketchum, ID (BW Ketchum) downstream to the Big Wood River at Hailey, ID (BW Hailey), but decreased by nearly 50 percent from BW Hailey downstream to Big Wood River at Stanton Crossing near Bellevue, ID (BW Stanton). Annual variability in daily mean discharge among main-stem sites was highest at BW Stanton, suggesting that this part of the river may be subject to some level of flow alteration. Hydrologic alterations resulting in flow reduction can contribute to higher water temperature, especially during the summer months when conditions are often most stressful to fish and other stream organisms. Daily water temperature and water temperature trends from June to September 2014 are reported for select tributary and main-stem sites on the Big Wood River and can be used to assess the potential for biological impairment based on aquatic life temperature criteria for cold-water streams. The State of Idaho maximum temperature criteria for protection of cold-water aquatic life of 22 °C was exceeded at Warm Sp and BW Stanton during summer 2014, but at none of the other main-stem or tributary sites. The 13 °C critical temperature criterion for salmonid spawning was exceeded in early July 2014 at BW Ketchum and BW Hailey near the end of the rainbow trout critical spawning and rearing period. Temperature exceedances were most frequent at BW Stanton, where exceedances for rainbow trout and brown trout occurred from May through early July 2014 during most of the critical spawning and rearing period. Water quality and habitat availability did not seem to be limiting for fish or other aquatic organisms at most sites in the Big Wood River watershed. Water quality assessments in September 2014 determined no exceedances of total maximum daily load target levels. The availability and quality of habitat was limited at BW Stanton, where shallow-water habitat conditions prevailed. Macroinvertebrate community diversity was high at all sites except for BW Stanton, where low community diversity was attributed to low species richness and high abundances of a few tolerant taxa. Presence of low species diversity and high macroinvertebrate tolerance values at BW Stanton indicates that benthic community condition and stream health were reduced at that location. Fish surveys done in September 2014 did not indicate any significant reductions in native fish communities in the Big Wood River or its tributaries. Native rainbow trout ( Oncorhynchus mykiss ) and Wood River sculpin ( Cottus leiopomus ) were the dominant fish species in the drainage and were found at all tributary and main-stem sites. Non-native brown ( Salmo trutta ) and brook trout ( Salvelinus fontinalis ) were limited to lower drainage sites on the Big Wood River (BW Hailey and BW Stanton), and occurred in relatively low numbers.

Idaho↗
USGS2016

Mercury concentrations in water and mercury and selenium concentrations in fish from Brownlee Reservoir and selected sites in the Boise and Snake Rivers, Idaho and Oregon, 2013–15

Mercury (Hg) analyses were conducted on samples of sport fish and water collected from selected sampling sites in Brownlee Reservoir and the Boise and Snake Rivers to meet National Pollution Discharge and Elimination System (NPDES) permit requirements for the City of Boise, Idaho, between 2013 and 2015. City of Boise personnel collected water samples from six sites between October and November 2013 and 2015, with one site sampled in 2014. Total Hg concentrations in unfiltered water samples ranged from 0.48 to 8.8 nanograms per liter (ng/L), with the highest value in Brownlee Reservoir in 2013. All Hg concentrations in water samples were less than the U.S. Environmental Protection Agency (USEPA) Hg chronic aquatic life criterion of 12 ng/L. The USEPA recommended a water-quality criterion of 0.30 milligrams per kilogram (mg/kg) methylmercury (MeHg) expressed as a fish-tissue residue value (wet-weight MeHg in fish tissue). The Idaho Department of Environmental Quality adopted the USEPA’s fish-tissue criterion and established a reasonable potential to exceed (RPTE) threshold 20 percent lower than the criterion or greater than 0.24 mg/kg Hg based on an average concentration of 10 fish from a receiving waterbody. NPDES permitted discharge to waters with fish having Hg concentrations exceeding 0.24 mg/kg are said to have a reasonable potential to exceed the water-quality criterion and thus are subject to additional permit obligations, such as requirements for increased monitoring and the development of a Hg minimization plan. The Idaho Fish Consumption Advisory Program (IFCAP) issues fish advisories to protect general and sensitive populations of fish consumers and has developed an action level of 0.22 mg/kg Hg in fish tissue. Fish consumption advisories are water body- and species-specific and are used to advise allowable fish consumption from specific water bodies. The geometric mean Hg concentration of 10 fish of a single species collected from a single water body (lake or stream) in Idaho is compared to the action level to determine if a fish consumption advisory should be issued. The U.S. Geological Survey collected and analyzed individual fillets of mountain whitefish ( Prosopium williamsoni ), rainbow trout ( Oncorhynchus mykiss ), smallmouth bass ( Micropterus dolomieu ), and channel catfish ( Ictalurus punctatus ) for Hg. The 2013 average Hg concentration for small mouth bass (0.32 mg/kg) collected at Brownlee Reservoir and for channel catfish (0.33 mg/kg) collected at the Boise River mouth, exceeded the Idaho water quality criterion (>0.3 mg/kg), the Hg RPTE threshold (>0.24 mg/kg), and the IFCAP action level (>0.22 mg/kg). Average Hg concentrations in fish collected in 2014 or 2015 did not exceed evaluation criteria for any of the species assessed. Selenium (Se) analysis was conducted on one composite fish tissue sample per site to assess general concentrations and to provide information for future risk assessments. Composite concentrations of Se in fish tissue collected between 2013 and 2015 ranged from 0.07 and 0.49 mg/kg wet weight with the highest concentration collected from smallmouth bass from the Snake River near Murphy, and the lowest from mountain whitefish from the Boise River at Eckert Road.

Idaho↗
USGS2015

Evaluation of mercury in rainbow trout collected from Duck Valley Indian Reservation reservoirs, southwestern Idaho and northern Nevada, 2007, 2009, and 2013

The U.S. Geological Survey, in cooperation with the Shoshone-Paiute Tribes of the Duck Valley Indian Reservation, analyzed mercury (Hg) concentration in rainbow trout ( Oncorhynchus mykiss ) collected from three reservoirs on the reservation (Mountain View, Lake Billy Shaw, and Sheep Creek) during sampling events in 2007, 2009, and 2013, to determine the risk of Hg exposure to Tribal members and the general public. Mercury concentration in predatory fish tends to increase with fish length, and this tendency was true for rainbow trout in the reservoirs on the reservation (r 2 = 0.44–0.70). Mean (average) and median Hg concentrations in fish tissue were determined for each reservoir for each sample year. All Hg concentrations were less than the U.S. Environmental Protection Agency’s water-quality criterion of 0.30 milligram per kilogram (mg/kg wet weight [ww]) and the Idaho Department of Environmental Quality’s reasonable potential to exceed threshold of 0.24 mg/kg. Idaho Department of Health and Welfare toxicologists determined that the Hg concentrations in rainbow trout in this study would not warrant a fish-consumption advisory for this species. Throughout this report, statistical findings with a p -value of less than 0.05 are referred to as “significant.” Mean Hg concentrations in fish-tissue samples collected from Mountain View Reservoir were higher in 2007 (0.12 mg/kg ww) than in 2009 and 2013 (0.07 and 0.06 mg/kg ww, respectively), indicating a significant mean decrease. Mean Hg concentrations in fish-tissue samples collected from Lake Billy Shaw showed no significant differences among sample years (2007, 0.12 mg/kg ww; 2009, 0.07 mg/kg ww; 2013, 0.09 mg/kg ww). Mean Hg concentrations in fish-tissue samples collected from Sheep Creek Reservoir significantly increased in 2013 (0.10 mg/kg ww) from concentrations in 2007 and 2009 (0.06 and 0.05 mg/kg ww, respectively). These temporal and spatial variations are not unexpected, as each body of water may differ in the factors and conditions affecting the rate of methylation and demethylation. Coupled with the dynamic put-and-take fishery, the outcomes reflect the system complexities among reservoirs despite their fairly close proximity to one another. The influence of these other factors is evident when the analysis of atmospheric Hg deposition at Mercury Deposition Network site NV02 in northern Nevada showed no significant linear trend in wet Hg deposition rates for 2003–2013 (average 3.02 micrograms per square meter).

Idaho, Nevada↗
USGS2014

Mercury concentrations in water, and mercury and selenium concentrations in fish from Brownlee Reservoir and selected sites in Boise and Snake Rivers, Idaho and Oregon, 2013

Mercury (Hg) analyses were conducted on samples of sport fish and water collected from six sampling sites in the Boise and Snake Rivers, and Brownlee Reservoir to meet National Pollution Discharge and Elimination System (NPDES) permit requirements for the City of Boise, Idaho. A water sample was collected from each site during October and November 2013 by the City of Boise personnel and was analyzed by the Boise City Public Works Water Quality Laboratory. Total Hg concentrations in unfiltered water samples ranged from 0.73 to 1.21 nanograms per liter (ng/L) at five river sites; total Hg concentration was highest (8.78 ng/L) in a water sample from Brownlee Reservoir. All Hg concentrations in water samples were less than the EPA Hg chronic aquatic life criterion in Idaho (12 ng/L). The EPA recommended a water-quality criterion of 0.30 milligrams per kilogram (mg/kg) methylmercury (MeHg) expressed as a fish-tissue residue value (wet-weight MeHg in fish tissue). MeHg residue in fish tissue is considered to be equivalent to total Hg in fish muscle tissue and is referred to as Hg in this report. The Idaho Department of Environmental Quality adopted the EPA’s fish-tissue criterion and a reasonable potential to exceed (RPTE) threshold 20 percent lower than the criterion or greater than 0.24 mg/kg based on an average concentration of 10 fish from a receiving waterbody. NPDES permitted discharge to waters with fish having Hg concentrations exceeding 0.24 mg/kg are said to have a reasonable potential to exceed the water-quality criterion and thus are subject to additional permit obligations, such as requirements for increased monitoring and the development of a Hg minimization plan. The Idaho Fish Consumption Advisory Program (IFCAP) issues fish advisories to protect general and sensitive populations of fish consumers and has developed an action level of 0.22 mg/kg wet weight Hg in fish tissue. Fish consumption advisories are water body- and species-specific and are used to advise of allowable fish consumption from specific water bodies. The geometric mean Hg concentration of 10 fish of a single species collected from a single water body (lake or stream) in Idaho is compared to the action level to determine if a fish consumption advisory should be issued. The U.S. Geological Survey collected and analyzed individual fillets of mountain whitefish ( Prosopium williamsoni ), smallmouth bass ( Micropterus dolomieu ), and channel catfish ( Ictalurus punctatus ) for Hg. The median Hg concentration of 0.32 mg/kg exceeded the Idaho water-quality criterion at the site in Brownlee Reservoir. Average Hg concentrations from Brownlee Reservoir (0.32 mg/kg) and the Boise River at mouth (0.33 mg/kg) exceeded the Hg RPTE threshold (>0.24 mg/kg). IFCAP action levels also were exceeded at the sites on Brownlee Reservoir and at the mouth of the Boise River. Median Hg concentrations in fish at the remaining four river sites were less than 0.20 mg/kg with average concentrations ranging from 0.14 to 0.21 mg/kg Hg. Selenium (Se) analysis also was conducted on one composite fish tissue sample per site to screen for general concentrations and to provide information for future risk assessments. Concentrations of Se ranged from 0.07 to 0.49 mg/kg wet weight; average concentrations were highest in smallmouth bass (0.40 mg/kg) and lowest in mountain whitefish (0.12 mg/kg).

Idaho;Oregon↗
USGS2014

Water-quality and biological conditions in selected tributaries of the Lower Boise River, southwestern Idaho, water years 2009-12

Water-quality conditions were studied in selected tributaries of the lower Boise River during water years 2009–12, including Fivemile and Tenmile Creeks in 2009, Indian Creek in 2010, and Mason Creek in 2011 and 2012. Biological samples, including periphyton biomass and chlorophyll-a, benthic macroinvertebrates, and fish were collected in Mason Creek in October 2011. Synoptic water-quality sampling events were timed to coincide with the beginning and middle of the irrigation season as well as the non-irrigation season, and showed that land uses and irrigation practices affect water quality in the selected tributaries. Large increases in nutrient and sediment concentrations and loads occurred over relatively short stream reaches and affected nutrient and sediment concentrations downstream of those reaches. Escherichia coli (E. coli) values increased in study reaches adjacent to pastured lands or wastewater treatment plants, but increased E. coli values at upstream locations did not necessarily affect E. coli values at downstream locations. A spatial loading analysis identified source areas for nutrients, sediment, and E. coli , and might be useful in selecting locations for water-quality improvement projects. Effluent from wastewater treatment plants increased nutrient loads in specific reaches in Fivemile and Indian Creeks. Increased suspended-sediment loads were associated with increased discharge from irrigation returns in each of the studied tributaries. Samples collected during or shortly after storms showed that surface runoff, particularly during the winter, may be an important source of nutrients in tributary watersheds with substantial agricultural land use. Concentrations of total phosphorus, suspended sediment, and E. coli exceeded regulatory water-quality targets or trigger levels at one or more monitoring sites in each tributary studied, and exceedences occurred during irrigation season more often than during non-irrigation season. As with water-quality sampling results, bottom-sediment samples analyzed for contaminants of emerging concern indicated that adjacent land uses can affect in-stream conditions. Contaminants of emerging concern were detected in four categories: urban compounds, industrial compounds, fecal steroids, and personal care products. Compounds in one or more of the four contaminant categories were detected at higher concentrations in upstream sites than in downstream sites in the tributaries and in the lower Boise River. High concentrations of compounds in upstream locations indicated that adjacent land use might be an important factor in contributing contaminants of emerging concern to the lower Boise River watershed. Expanded monitoring at Mason Creek near the mouth included a streamgage, a continuous water-quality monitor, and monthly water-quality sample collection. Data collected during expanded monitoring efforts at Mason Creek near the mouth provided information to develop and compare water-quality models. Regression models were developed using turbidity, discharge, and seasonality as surrogates to estimate concentrations of water-quality constituents. Daily streamflow also was used in a load model to estimate daily loads of water-quality constituents. Surrogate regression models may be useful for long-term monitoring and generally performed better than other models to estimate concentrations and loads of total phosphorus, total nitrogen, and suspended sediment in Mason Creek. Biological sampling results from Mason Creek showed low periphyton biomass and chlorophyll-a concentrations compared to those historically measured in the Boise River near Parma, Idaho, during October and November. The most abundant invertebrate found in Mason Creek was the highly tolerant and invasive New Zealand mudsnail ( Potamopyrgus antipodarum ). The presence of small rainbow trout (90 millimeters) may indicate salmonid spawning in Mason Creek. The rangeland-fish-index score of 58 for Mason Creek is comparable to rangeland-fish-index scores calculated for the Boise River near Middleton, indicating intermediate biotic condition.

Idaho↗
USGS2013

Monitoring plan for mercury in fish tissue and water from the Boise River, Snake River, and Brownlee Reservoir, Idaho and Oregon

The methylmercury criterion adopted as a water-quality standard in the State of Idaho is a concentration in fish tissue rather than a concentration in water. A plan for monitoring mercury in fish tissue and water was developed to evaluate whether fish in the Boise River, Idaho, upstream and downstream of wastewater-treatment plant discharges, meet the methylmercury water-quality criterion. Monitoring also will be conducted at sites on the Snake River, upstream and downstream of the confluence with the Boise River, and in Brownlee Reservoir, which lies along the border between Idaho and Oregon. Descriptions of standard procedures for collecting and processing samples and quality assurance steps are included. This monitoring plan is intended to provide a framework for cooperative methylmercury sampling in the lower Boise River basin.

Idaho;Oregon↗
USGS2012

The occurrence of trace elements in bed sediment collected from areas of varying land use and potential effects on stream macroinvertebrates in the conterminous western United States, Alaska, and Hawaii, 1992-2000

As part of the National Water-Quality Assessment Program of the U.S. Geological Survey, this study examines the occurrence of nine trace elements in bed sediment of varying mineralogy and land use and assesses the possible effects of these trace elements on aquatic-macroinvertebrate community structure. Samples of bed sediment and macroinvertebrates were collected from 154 streams at sites representative of undeveloped, agricultural, urban, mined, or mixed land-use areas and 12 intermediate-scale ecoregions within the conterminous western United States, Alaska, and Hawaii from 1992 to 2000. The nine trace elements evaluated during this study—arsenic (As), cadmium (Cd), chromium (Cr), copper (Cu), lead (Pb), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn)—were selected on the basis of potential ecologic significance and availability of sediment-quality guidelines. At most sites, the occurrence of these trace elements in bed sediment was at concentrations consistent with natural geochemical abundance, and the lowest concentrations were in bed-sediment samples collected from streams in undeveloped and agricultural areas. With the exception of Zn at sampling sites influenced by historic mining-related activities, median concentrations of all nine trace elements in bed sediment collected from sites representative of the five general land-use areas were below concentrations predicted to be harmful to aquatic macroinvertebrates. The highest concentrations of As, Cd, Pb, and Zn were in bed sediment collected from mined areas. Median concentrations of Cu and Ni in bed sediment were similarly enriched in areas of mining, urban, and mixed land use. Concentrations of Cr and Ni appear to originate largely from geologic sources, especially in the western coastal states (California, Oregon, and Washington), Alaska, and Hawaii. In these areas, naturally high concentrations of Cr and Ni can exceed concentrations that may adversely affect aquatic macroinvertebrates. Generally, Hg concentrations were below the sediment-quality guideline for this trace element but appeared elevated in urbanized areas and at sites contaminated by historic mining practices. Lastly, although there was no distinctive pattern in Se concentrations with land use, median bed-sediment concentrations were slightly elevated in urbanized areas. Macroinvertebrate community structure was influenced by topographic, geologic, climatic, and in-stream characteristics. To account for inherent distribution patterns resulting from these influences, samples of macroinvertebrates were stratified by ecoregion to assess the influence of trace elements on community structure. Cumulative toxic units (CTUs) were used to evaluate gradients in trace-element concentrations in mixture. Correlation analyses among the trace elements under different land-use conditions indicate that trace-element mixtures vary among bed sediment and can have a marked influence on CTU composition. Macroinvertebrate response to bed-sediment trace-element exposure was evident only at the most highly contaminated sites, notably at sites classified as contaminated by the Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) as a result of historic mining activities. Results of this study agree with the findings of other studies evaluating trace-element exposure to in-stream macroinvertebrate community structure in that generally lower richness metrics and taxa dominance occur in streams where high trace-element enrichment occurs; however, not all streams in all areas have the same characterizing taxa. In the mountain and xeric ecosystems, the mayfly, Baetis sp.; the Diptera, Simulium sp.; caddisflies in the family Hydropsychiidae; midges in the family Orthocladiinae; and the worms belonging to Turbellaria and Naididae all demonstrated resilience to trace-element exposure and, in some cases, possible changes in physical habitat within stream ecosystems. The taxa characteristics within the Ozark Highland ecoregion were different than other ecoregions as evidenced by generally more diverse mayfly populations. In addition, Baetis sp. was common and dominated many of the mayfly populations found in the Rocky Mountain streams within the Mountain Southern Rockies and Mountain Northern Rockies ecoregions; however, within the Ozark Highland ecoregion, Tricorythodes sp. appeared to be more common than Baetis sp.

Alaska, Arizona, California, Colorado, Hawai'i, Id↗
USGS2006

Fish communities and related environmental conditions of the lower Boise River, southwestern Idaho, 1974-2004

Within the last century, the lower Boise River has been transformed from a meandering, braided, gravel-bed river that supported large runs of salmon to a channelized, regulated, urban river that provides flood control and irrigation water to more than 1,200 square miles of land. An understanding of the current status of the river's fish communities and related environmental conditions is important to support the ongoing management of the Boise River. Therefore, fish community data from the U.S. Geological Survey and the Idaho Department of Fish and Game collected since 1974 were analyzed to describe the status of fish communities in the lower Boise River. Each set of data was collected to address different study objectives, but is combined here to provide an overall distribution of fish in the lower Boise River over the last 30 years. Twenty-two species of fish in 7 families have been identified in the lower Boise River-3 salmonidae, trout and whitefish; 2 cottidae, sculpins; 3 catostomidae, suckers; 7 cyprinidae, minnows; 4 centrarchidae, sunfish; 2 ictaluridae, catfish; and 1 cobitidae, loach. Analysis of fish community data using an Index of Biotic Integrity (IBI) for Northwest rivers shows a decrease in the biotic integrity in a downstream direction, with the lowest IBI near the mouth of the Boise River. The number of tolerant and introduced fish were greater in the lower reaches of the river. Changes in land use, habitat, and water quality, as well as regulated streamflow have affected the lower Boise River fish community. IBI scores were negatively correlated with maximum instantaneous water temperature, specific conductance, and suspended sediment; as well as the basin land-use metrics, area of developed land, impervious surface area, and the number of major diversions upstream of a site. Fish communities in the upstream reaches were dominated by piscivorous fish, whereas the downstream reaches were dominated by tolerant, omnivorous fish. The percentage of sculpin in the river decreased in a downstream direction, and sculpin disappear completely at sites downstream of Glenwood Bridge. The sculpin population increased downstream of the Lander wastewater-treatment facility within the last decade, possibly as a result of improved wastewater treatment. The condition of the mountain whitefish (Prosopium williamsoni) throughout the lower Boise River was good and was similar both to the condition of mountain whitefish from least-disturbed rivers in southern Idaho and to the North American standard weight for mountain whitefish.

Scientific Investigations Report↗
USGS2004

Phosphorus and suspended sediment load estimates for the Lower Boise River, Idaho, 1994-2002

The U.S. Geological Survey used LOADEST, newly developed load estimation software, to develop regression equations and estimate loads of total phosphorus (TP), dissolved orthophosphorus (OP), and suspended sediment (SS) from January 1994 through September 2002 at four sites on the lower Boise River: Boise River below Diversion Dam near Boise, Boise River at Glenwood Bridge at Boise, Boise River near Middleton, and Boise River near Parma. The objective was to help the Idaho Department of Environmental Quality develop and implement total maximum daily loads (TMDLs) by providing spatial and temporal resolution for phosphorus and sediment loads and enabling load estimates made by mass balance calculations to be refined and validated. Regression models for TP and OP generally were well fit on the basis of regression coefficients of determination (R2), but results varied in quality from site to site. The TP and OP results for Glenwood probably were affected by the upstream wastewater-treatment plant outlet, which provides a variable phosphorus input that is unrelated to river discharge. Regression models for SS generally were statistically well fit. Regression models for Middleton for all constituents, although statistically acceptable, were of limited usefulness because sparse and intermittent discharge data at that site caused many gaps in the resulting estimates. Although the models successfully simulated measured loads under predominant flow conditions, errors in TP and SS estimates at Middleton and in TP estimates at Parma were larger during high- and low-flow conditions. This shortcoming might be improved if additional concentration data for a wider range of flow conditions were available for calibrating the model. The average estimated daily TP load ranged from less than 250 pounds per day (lb/d) at Diversion to nearly 2,200 lb/d at Parma. Estimated TP loads at all four sites displayed cyclical variations coinciding with seasonal fluctuations in discharge. Estimated annual loads of TP ranged from less than 8 tons at Diversion to 570 tons at Parma. Annual loads of dissolved OP peaked in 1997 at all sites and were consistently higher at Parma than at the other sites. The ratio of OP to TP varied considerably throughout the year at all sites. Peaks in the OP:TP ratio occurred primarily when flows were at their lowest annual stages; estimated seasonal OP:TP ratios were highest in autumn at all sites. Conversely, when flows were high, the ratio was low, reflecting increased TP associated with particulate matter during high flows. Parma exhibited the highest OP:TP ratio during all seasons, at least 0.60 in spring and nearly 0.90 in autumn. Similar OP:TP ratios were estimated at Glenwood. Whereas the OP:TP ratio for Parma and Glenwood peaked in November or December, decreased from January through May, and increased again after June, estimates for Diversion showed nearly the opposite pattern ? ratios were highest in July and lowest in January and February. This difference might reflect complex biological and geochemical processes involving nutrient cycling in Lucky Peak Lake, but further data are needed to substantiate this hypothesis. Estimated monthly average SS loads were highest at Diversion, about 400 tons per day (ton/d). Average annual loads from 1994 through 2002 were 144,000 tons at Diversion, 33,000 tons at Glenwood, and 88,000 tons at Parma. Estimated SS loads peaked in the spring at all sites, coinciding with high flows. Increases in TP in the reach from Diversion to Glenwood ranged from 200 to 350 lb/d. Decreases in TP were small in this reach only during high flows in January and February 1997. Decreases in SS, were large during high-flow conditions indicating sediment deposition in the reach. Intermittent data at Middleton indicated that increases and decreases in TP in the reach from Glenwood to Middleton were during low- and high-flow conditions, respectively. All constituents increased in the r

Scientific Investigations Report↗
USGS2003

Ecological indicators of water quality in the Spokane River, Idaho and Washington, 1998 and 1999

A water-quality investigation of the Spokane River was completed during summer low-flow conditions in 1998 and 1999 as part of the USGS NAWQA Program, in cooperation with the WDOE. (Abbreviations used in this report are defined on the last page.) Samples for analyses of water chemistry; bed sediment; aquatic communities (fish, macroinvertebrates, and algae); contaminants in tissue (fish and macroinvertebrates); and associated measures of habitat were collected at six sites downstream from Coeur d’Alene Lake between river miles 63 and 100. These data provided baseline information to evaluate the water-quality status of the Spokane River and can be used to determine the ecological risk to aquatic organisms from contaminants.

Washington;Idaho↗
USGS2001

PCBs in tissue of fish from the Spokane River, Washington, 1999

Several studies over the past 6 years have indicated that elevated concentrations of polychlorinated biphenyls (PCBs) in the Spokane River, Washington, are a potential hazard to human and aquatic health. To help address these concerns, fish were collected from the Spokane River in 1999 and analyzed for PCBs for a cooperative study by the U.S. Geological Survey (as part of the National Water-Quality Assessment Program) and the Washington State Department of Ecology. This Fact Sheet summarizes comparisons of PCB concentrations in fish tissue recommended by national criteria with concentrations in fish tissue analyzed for this 1999 cooperative study and for previous studies.

Washington;Idaho;Montana↗
USGS1998

Water quality assessment of the Sacramento River Basin, California: Environmental setting and study design

This report describes the environmental setting and investigative activities of the Sacramento River Basin study unit of the National Water-Quality Assessment Program. The Sacramento River Basin is one of 60 study units located throughout the United States that has been scheduled for study as part of the National Water-Quality Assessment Program. The Sacramento River Basin is the most important source of freshwater in California. Water quality studies in the Sacramento River Basin study unit focus on the Sacramento Valley because it is here that the principal uses of water and potential impacts on water quality occur. Investigative activities include a network of surface water sites, where water chemistry and aquatic biological sampling are done, and a variety of ground water studies. In addition, investigations of the cycling and distribution of volatile organic compounds in the urban environment and the distribution of total and methyl mercury in the Sacramento River and tributaries will be completed.

California↗
USGS1995

Dissolved pesticide data for the San Joaquin River at Vernalis and the Sacramento River at Sacramento, California, 1991-94

Water samples were collected from sites on the San Joaquin and Sacramento Rivers, California and were analyzed for dissolved organic pesticides. This data collection and analysis are a part of an ongoing project by the U.S. Geological Survey Toxic Contaminants Hydrology program to determine the fate and transport of organic pesticides that enter the San Francisco Bay Estuary. Concentrations of selected pesticides were measured in filtered water samples using solid-phase extraction and gas chromatograph-mass spectrometry at the U.S. Geological Survey organic chemistry laboratory in Sacramento.

California↗