USGS Science⌕ Search

Geology topics

C. D. McIntire

Publications and source records attributed to C. D. McIntire.

9 recordsLinked to original sources
USGS2021

Global application of an unoccupied aerial vehicle photogrammetry protocol for predicting aboveground biomass in non-forest ecosystems

Non-forest ecosystems, dominated by shrubs, grasses and herbaceous plants, provide ecosystem services including carbon sequestration and forage for grazing, and are highly sensitive to climatic changes. Yet these ecosystems are poorly represented in remotely sensed biomass products and are undersampled by in situ monitoring. Current global change threats emphasize the need for new tools to capture biomass change in non-forest ecosystems at appropriate scales. Here we developed and deployed a new protocol for photogrammetric height using unoccupied aerial vehicle (UAV) images to test its capability for delivering standardized measurements of biomass across a globally distributed field experiment. We assessed whether canopy height inferred from UAV photogrammetry allows the prediction of aboveground biomass (AGB) across low-stature plant species by conducting 38 photogrammetric surveys over 741 harvested plots to sample 50 species. We found mean canopy height was strongly predictive of AGB across species, with a median adjusted R 2 of 0.87 (ranging from 0.46 to 0.99) and median prediction error from leave-one-out cross-validation of 3.9%. Biomass per-unit-of-height was similar within but different among, plant functional types. We found that photogrammetric reconstructions of canopy height were sensitive to wind speed but not sun elevation during surveys. We demonstrated that our photogrammetric approach produced generalizable measurements across growth forms and environmental settings and yielded accuracies as good as those obtained from in situ approaches. We demonstrate that using a standardized approach for UAV photogrammetry can deliver accurate AGB estimates across a wide range of dynamic and heterogeneous ecosystems. Many academic and land management institutions have the technical capacity to deploy these approaches over extents of 1–10 ha −1 . Photogrammetric approaches could provide much-needed information required to calibrate and validate the vegetation models and satellite-derived biomass products that are essential to understand vulnerable and understudied non-forested ecosystems around the globe.

Remote Sensing in Ecology and Conservation↗
USGS2007

Variability of kokanee and rainbow trout food habits, distribution, and population dynamics, in an ultraoligotrophic lake with no manipulative management

Crater Lake is a unique environment to evaluate the ecology of introduced kokanee and rainbow trout because of its otherwise pristine state, low productivity, absence of manipulative management, and lack of lotic systems for fish spawning. Between 1986 and 2004, kokanee displayed a great deal of variation in population demographics with a pattern that reoccurred in about 10 years. We believe that the reoccurring pattern resulted from density dependent growth, and associated changes in reproduction and abundance, driven by prey resource limitation that resulted from low lake productivity exacerbated by prey consumption when kokanee were abundant. Kokanee fed primarily on small-bodied prey from the mid-water column; whereas rainbow trout fed on large-bodied prey from the benthos and lake surface. Cladoceran zooplankton abundance may be regulated by kokanee. And kokanee growth and reproductive success may be influenced by the availability of Daphnia pulicaria, which was absent in zooplankton samples collected annually from 1990 to 1995, and after 1999. Distribution and diel migration of kokanee varied over the duration of the study and appeared to be most closely associated with prey availability, maximization of bioenergetic efficiency, and fish density. Rainbow trout were less abundant than were kokanee and exhibited less variation in population demographics, distribution, and food habits. There is some evidence that the population dynamics of rainbow trout were in-part related to the availability of kokanee as prey. ?? 2007 Springer Science+Business Media B.V.

Hydrobiologia↗
USGS2002

Persistence of an unusual pelagic zooplankton assemblage in a clear, mountain lake

The planktonic zooplankton assemblage in Mowich Lake, Mount Rainier National Park (MORA), was composed almost entirely of rotifers in 1966 and 1967. Adult pelagic crustacean taxa were rare. Their paucity was attributed to predation by kokanee salmon (Oncorhynchus nerka), which had been stocked in 1961. During a park-wide survey of 24 lakes in 1988, Mowich Lake was the only one that did not contain at least one planktonic crustacean species. Given the apparent persistence of the unusual pelagic zooplankton assemblage in Mowich Lake, the first objective of this study was to document the interannual variation in the taxonomic structure of the zooplankton assemblages in the lake from 1988 through 1999. A second objective was to determine if it was possible to predict the taxonomic composition of the pelagic crustacean zooplankton assemblage in Mowich Lake prior to the stocking of kokanee salmon. The Mowich Lake zooplankton assemblages in 1988-1999 were consistent with those in 1966 and 1967. Crustacean taxa were extremely rare, but they included most of the primary taxa collected from 23 MORA lakes surveyed in 1988. Nonetheless, the 1988 collections showed that the September rotifer assemblage in Mowich Lake was similar to 10 of the 24 lakes sampled. Seven of the 10 lakes were dominated by cladocerans, primarily Daphnia rosea and Holopedium gibberum. Therefore, it appeared that either one or both of these species may have numerically dominated the crustacean zooplankton assemblage in the lake prior to 1961.

Hydrobiologia↗
USGS1998

Phytoplankton assemblages in high-elevation lakes in the northern Cascade Mountains, Washington State, USA

Phytoplankton assemblages in high-elevation lakes of North Cascades National Park Service Complex were studied during the open-water period in 1989. Collectively, 93 taxa were identified in 55 samples from 51 lakes. Based on cell densities, cyanobacteria had the highest relative abundance (36.7 %), followed by chlorophytes (29.8 %), and chrysophytes (19.6 %). Aphanocapsa delicatissima had the highest proportional abundance (14.0 %). Only 15.1 % percent of the taxa occurred in more than 20 samples. Phytoplankton cell densities increased following a gradient of increasing lake-water temperature, alkalinity, and concentration of total Kjeldahl-N with decreasing lake elevation. Chrysophytes and cyanobacteria were quantitatively (relative abundance) the most important taxa in alpine and subalpine lakes, whereas cyanobacteria had the highest relative abundances in high-forest and low-forest lakes. Chlorophytes had their highest relative abundance in high-forest lakes. Although low in relative abundance, diatoms and dinoflagellates were most abundant in alpine lakes. An ordination by correspondence analysis indicated that most alpine, subalpine, and high-forest lakes had similar floras. Although a few subalpine lakes exhibited deviations from this pattern, the main differences in phytoplankton composition were found in a group of low-forest and high-forest lakes. Canonical correspondence analysis (CCA) provided evidence that the distribution of samples and taxa in ordination space was correlated with a gradient of decreasing lake elevation and increasing water temperature, alkalinity, and concentration of nitrogen. When CCA was used to examine relationships among phytoplankton taxa and vegetation zones, a continuous distribution of taxa was found from the low-forest zone to the subalpine zone, with a large number of taxa occurring primarily in the subalpine and high-forest zones. Three phytoplankton taxa occurred primarily in alpine lakes, whereas five taxa co-occurred in alpine, subalpine, and high forest zones. Collectively, lake elevation and associated changes in water quality and concentrations of nutrients, especially nitrogen, appeared to be the primary physical and chemical factors influencing the taxonomic structures of phytoplankton assemblages.

Washington↗
USGS1996

Temperature, water chemistry, and optical properties of Crater Lake

Water temperature, water chemistry, and optical properties of Crater Lake were studied from 1983 to 1991. In winter and spring, wind energy and convection mixed the water column to a depth of 200 to 250 m. The lake was thermally stratified in summer and early fall; however, the epilimnion was only 5 to 20 m thick, and most of the 589 m deep water column was a cold hypolimnion. The lake was slightly basic, with moderate alkalinity and conductivity. The water column was oxygenated, although slight decreases in dissolved oxygen concentration were noticed near the lake bottom in late summer and early fall. Phosphorus and nitrogen concentrations were low. Orthophosphorus-P concentrations increased slightly with increased lake depth, whereas nitrate-N was below detection limits in the upper 200 m of the water column and then increased with increased lake depth. Secchi disk clarity typically varied from the high-20-m to low-30-m range. The depth of 1 % surface incident light (425–655 nm) in July and August typically ranged between 80 and 100 m. The results also indicated that water temperature, water chemistry, and optical properties of the lake between 1983 and 1991 were consistent with those observed between 1896 and 1982.

Journal of Lake and Reservoir Management↗
USGS1996

Taxonomic structure and productivity of phytoplankton assemblages in Crater Lake, Oregon

Interactions among physical, chemical, and biological components and processes in Crater Lake result in a complex and dynamic ecosystem. In winter and spring, wind energy mixes the lake to a depth of about 200 m. During this period, episodic sinking of cold water below the depth of 200 m produces an upwelling of nutrient-rich water from the deep lake, a process that has a strong influence on the concentrations of nutrients available to phytoplankton in the euphotic zone. Patterns of upwelling are variable from year to year, and physical data indicate that water from the deep lake is completely mixed with surface water every 1–4 years. Phytoplankton cell biovolume and total chlorophyll are distributed uniformly to the depth of 200 m in winter and spring, at which time maximum rates of primary production occur in the upper 60 m of the water column. The onset of thermal stratification in July is associated with development of a chlorophyll maximum at depths between 100 and 140 m and a downward shift of the primary production maximum to depths between 60 and 100 m. Thermal stratification also is accompanied by a stratified distribution of phytoplankton populations that is characterized by assemblages with low species diversity and high dominance in the epilimnion and assemblages with higher diversity and lower dominance in the metalimnion and upper hypolimnion. Therefore, the thermal properties of the upper 200 m of Crater Lake, and associated changes in light and nutrients with increasing depth, are closely related to structural and functional attributes of phytoplankton assemblages in the water column.

Journal of Lake and Reservoir Management↗
USGS1994

Integrating limnological characteristics of high mountain lakes into the landscape of a natural area

A general conceptual watershed-lake model of the complex interactions among climatic conditions, watershed location and characteristics, lake morphology, and fish predation was used to evaluate limnological characteristics of high mountain lakes. Our main hypothesis was that decreasing elevation in mountainous terrain corresponds to an increase in diversity of watershed size and lake area, depth, temperature, nutrient concentrations, and productivity. A second hypothesis was that watershed location and aspect relative to climatic gradients within mountainous terrain influences the limnological characteristics of the lakes. We evaluated these hypotheses by examining watershed location, aspect and size; lake morphology; water quality; and phytoplankton and zooplankton community characteristics among high mountain forest and subalpine lakes in Mount Rainier National Park. Although many of the comparisons between all forest and subalpine lakes were statistically insignificant, the results revealed trends that were consistent with our hypotheses. The forest lake group included more lakes with larger watersheds, larger surface areas, greater depths, higher concentrations of nutrients, and higher algal biovolumes than did the group of subalpine lakes. Deep lakes, which were mostly of the forest lake type, exhibited thermal stratification and relatively high values of some of the water-quality variables near the lake bottoms. However, the highest near-surface water temperatures and phytoplankton densities and the taxonomic structures of the phytoplankton and zooplankton assemblages were more closely related to geographical location, which corresponded to a west-east climate gradient in the park, than to lake type. Some crustacean and rotifer taxa, however, were limited in distribution by lake type. Fish predation did not appear to play an important role in the structure of the crustacean zooplankton communities at the genus level with the exception of Mowich Lake, where crustacean taxa were absent from the zooplankton community. This was the only lake inhabited by a true zooplanktivourous species of fish.

Environmental Management↗
USGS1994

Vertical distribution of a deep-water moss and associated epiphytes in Crater Lake, Oregon

A one-person submersible was used to examine the vertical distribution of the deep-water moss Drepanocladus aduncus (Hedw.) Warnst in Crater Lake (Oregon). Living specimens were found attached to sediment and rocks at depths between 25 m and 140 m. Dense beds of the moss were observed at depths between 30 m and 80 m, a region that corresponded roughly to the zone of maximum primary production by phytoplankton. The moss population supported a diverse assemblage of epiphytic algae, of which the most abundant genera included Cladophora,Oedogonium, Rhizoclonium, Tribonema, Vaucheria, and the diatoms Cocconeis, Cymbella, Epithemia, Fragilaria, Gomphonema, Melosira, Navicula, and Synedra. Chemical and physical data supported the hypothesis that the lower limit of distribution of the moss is determined by light limitation, whereas the upper limit is related to the availability of nutrients, particularly nitrate-nitrogen and trace elements. Deep-water videotapes of the moss population indicated that D. aduncus with its epiphytic algae was abundant enough in regions associated with the metalimnion and upper hypolimnion to have a potential influence on the nutrient dynamics of the Crater Lake ecosystem. Although the maximum depth at which living bryophytes occur in Crater Lake is similar to that found for Lake Tahoe, conditions in Lake Tahoe allow the growth and survival of a much more diverse assemblage of bryophytes and charophytes than is present in Crater Lake.

Northwest Science↗