USGS ScienceSearch

Geology topics

Anne G. Ernst

Publications and source records attributed to Anne G. Ernst.

12 recordsLinked to original sources

Response of periphyton fatty acid composition to supplemental flows in the upper Esopus Creek, Catskill Mountains, New York

Fatty acid analysis of periphyton is an emerging tool for assessing the condition of a stream ecosystem on the basis of its water quality. The study presented in this report was designed to test the hypothesis that periphyton communities have a fatty acid profile that can detect excessive turbidity and suspended sediment. The fatty acid composition of periphyton was assessed during two seasons upstream and downstream from an underground aqueduct that provides supplemental flows, which are a potential source of turbidity and suspended sediment on the upper Esopus Creek, New York. These data were compared with measurements of periphyton standing crop, diatom community structure and integrity, and basic water-quality parameters. Periphyton standing crop and diatom community integrity indicated little evidence of impairment from the supplemental flows. The relative abundances of two physiologically important fatty acids, γ-linolenic acid (18:3ω6) and eicosapentaenoic acid (20:5ω3), were significantly lower downstream from the supplemental flows and multivariate analyses of fatty acid profiles identified significant differences between sites upstream and downstream from the supplemental flows. Individual fatty acids and summary metrics, however, were not significantly correlated with turbidity or suspended sediment. Together, these results indicate that the supplemental flows may cause some measurable effects but they do not constitute a major disturbance to the periphyton community on the upper Esopus Creek. Fatty acid analysis may have potential as a tool for monitoring changes in periphyton nutritional composition that may reflect water quality and ecosystem health but needs to be further evaluated around a more definitive source of water-quality impairment.

New York

Identifying trout refuges in the Indian and Hudson Rivers in northern New York through airborne thermal infrared remote sensing

The locations and sizes of potential cold-water refuges for trout were examined in 2005 along a 27-kilometer segment of the Indian and Hudson Rivers in northern New York to evaluate the extent of refuges, the effects of routine flow releases from an impoundment, and how these refuges and releases might influence trout survival in reaches that otherwise would be thermally stressed. This river segment supports small populations of brook trout (Salvelinus fontinalis ), brown trout ( Salmo trutta ), and rainbow trout (Oncorhynchus mykiss ) and also receives regular releases of reservoir-surface waters to support rafting during the summer, when water temperatures in both the reservoir and the river frequently exceed thermal thresholds for trout survival. Airborne thermal infrared imaging was supplemented with continuous, in-stream temperature loggers to identify potential refuges that may be associated with tributary inflows or groundwater seeps and to define the extent to which the release flows decrease the size of existing refuges. In general, the release flows overwhelmed the refuge areas and greatly decreased the size and number of the areas. Mean water temperatures were unaffected by the releases, but small-scale heterogeneity was diminished. At a larger scale, water temperatures in the upper and lower segments of the reach were consistently warmer than in the middle segment, even during passage of release waters. The inability of remote thermal infrared images to consistently distinguish land from water (in shaded areas) and to detect groundwater seeps (away from the shallow edges of the stream) limited data analysis and the ability to identify potential thermal refuge areas.

New York

Spatiotemporal variations in estrogenicity, hormones, and endocrine-disrupting compounds in influents and effluents of selected wastewater-treatment plants and receiving streams in New York, 2008-09

Endocrine-disrupting compounds (EDCs) in wastewater effluents have been linked to changes in sex ratios, intersex (in males), behavioral modifications, and developmental abnormalities in aquatic organisms. Yet efforts to identify and regulate specific EDCs in complex mixtures are problematic because little is known about the estrogen activity (estrogenicity) levels of many common and emerging contaminants. The potential effects of EDCs on the water quality and health of biota in streams of the New York City water supply is especially worrisome because more than 150 wastewater-treatment plants (WWTPs) are permitted to discharge effluents into surface waters and groundwaters of watersheds that provide potable water to more than 9 million people. In 2008, the U.S. Geological Survey (USGS), the New York State Department of Environmental Conservation (NYSDEC), New York State Department of Health (NYSDOH), and New York City Department of Environmental Protection (NYCDEP) began a pilot study to increase the understanding of estrogenicity and EDCs in effluents and receiving streams mainly in southeastern New York. The primary goals of this study were to document and assess the spatial and temporal variability of estrogenicity levels; the effectiveness of various treatment-plant types to remove estrogenicity; the concentrations of hormones, EDCs, and pharmaceuticals, personal care products (PPCPs); and the relations between estrogenicity and concentrations of hormones, EDCs, and PPCPs. The levels of estrogenicity and selected hormones, non-hormone EDCs, and PPCPs were characterized in samples collected seasonally in effluents from 7 WWTPs, once or twice in effluents from 34 WWTPs, and once in influents to 6 WWTPs. Estrogenicity was quantified, as estradiol equivalents, using both the biological e-screen assay and a chemical model. Results generally show that (1) estrogenicity levels in effluents varied spatially and seasonally, (2) a wide range of known and unknown EDCs were present in both WWTP effluents and receiving streams, (3) some effluents may be important sources of estrogenicity in weakly diluted streams, (4) measured levels of biological estrogenicity were often higher than estimated levels of chemical estrogenicity, and (5) the type of treatment had a large effect on the removal efficacy, and consequently, the estrogenicity levels observed in treated effluents.

New York

Natural-channel-design restorations that changed geomorphology have little effect on macroinvertebrate communities in headwater streams

Stream restorations that increase geomorphic stability can improve habitat quality, which should benefit selected species and local aquatic ecosystems. This assumption is often used to define primary restoration goals; yet, biological responses to restoration are rarely monitored or evaluated methodically. Macroinvertebrate communities were inventoried at 6 study reaches within 5 Catskill Mountain streams between 2002 and 2006 to characterize their responses to natural-channel-design (NCD) restoration. Although bank stability increased significantly at most restored reaches, analyses of variation showed that NCD restorations had no significant effect on 15 of 16 macroinvertebrate community metrics. Multidimensional scaling ordination indicated that communities from all reach types within a stream were much more similar to each other within any given year than they were in the same reaches across years or within any type of reach across streams. These findings indicate that source populations and watershed-scale factors were more important to macroinvertebrate community characteristics than were changes in channel geomorphology associated with NCD restoration. Furthermore, the response of macroinvertebrates to restoration cannot always be used to infer the response of other stream biota to restoration. Thus, a broad perspective is needed to characterize and evaluate the full range of effects that restoration can have on stream ecosystems.

Catskill Mountains

Variable responses of fish assemblages, habitat, and stability to natural-channel-design restoration in Catskill Mountain streams

Natural-channel-design (NCD) restorations were recently implemented within large segments of five first- and second-order streams in the Catskill Mountains of New York in an attempt to increase channel stability, reduce bed and bank erosion, and sustain water quality. In conjunction with these efforts, 54 fish and habitat surveys were done from 1999 to 2007 at six restored reaches and five stable control reaches to evaluate the effects of NCD restoration on fish assemblages, habitat, and bank stability. A before–after–control–impact study design and two-factor analysis of variance were used to quantify the net changes in habitat and fish population and community indices at treatment reaches relative to those at unaltered control reaches. The density and biomass of fish communities were often dominated by one or two small prey species and no or few predator species before restoration and by one or more trout (Salmonidae) species after restoration. Significant increases in community richness (30%), diversity (40%), species or biomass equitability (32%), and total biomass (up to 52%) in at least four of the six restored reaches demonstrate that NCD restorations can improve the health and sustainability of fish communities in geomorphically unstable Catskill Mountain streams over the short to marginally long term. Bank stability, stream habitat, and trout habitat suitability indices (HSIs) generally improved significantly at the restored reaches, but key habitat features and trout HSIs did not change or decreased at two of them. Fish communities and trout populations at these two reaches were not positively affected by NCD restorations. Though NCD restorations often had a positive effect on habitat and fish communities, our results show that the initial habitat conditions limit the relative improvements than can be achieved, habitat quality and stability do not necessarily respond in unison, and biotic and abiotic responses cannot always be generalized.

New York

Effects of natural-channel-design restoration on habitat quality in Catskill Mountain streams, New York

Stream restoration has received much attention in recent years, yet there has been little effort to evaluate its impacts on physical habitat, stability, and biota. A popular but controversial stream restoration approach is natural channel design (NCD), which cannot be adequately evaluated without a long-term, independent assessment of its effects on stream habitat. Six reaches of five Catskill Mountain streams in southeastern New York were restored during 2000–2003 following NCD techniques to decrease bed and bank degradation, decrease sediment loads, and improve water quality. Habitat surveys were conducted during summer low flows from 2001 to 2007. The effects of the NCD projects on stream condition were assessed via a before–after–control–impact study design to quantify the net changes in stream and bank habitat variables relative to those in unaltered control reaches. Analysis of variance tests of three different measures of bank stability show that on average stream stability increased at treatment sites for 2–5 years after restoration. Mean channel depth, thalweg depth, and the pool–riffle ratio generally increased, whereas mean channel width, percent streambank coverage by trees, and shade decreased. Habitat suitability indices for local salmonid species increased at four of six reaches after restoration. The changes in channel dimensions rendered them generally more characteristic of stabler stream forms in the given valley settings. Although these studies were done relatively soon after project completion, our findings demonstrate that habitat conditions can be improved in degraded Catskill Mountain streams through NCD restoration.

New York

Fish Communities and Habitat of Geomorphically Stable Reference Reaches in Streams of the Catskill Mountain Region, New York

In 2002, the U.S. Geological Survey, in cooperation with the New York City Department of Environmental Protection, began a 5-year study to develop a database that documents the physical and biological characteristics of nine stable reference reaches from seven streams in the New York City West of Hudson Water Supply Watershed in the Catskill Mountain region of New York State. Primary objectives of this study were to (1) develop a reference-reach database of morphology, aquatic biology, and fluvial processes, and (2) summarize the relations between fish communities, aquatic habitat, and stable stream morphology in streams in the Catskill Mountain region. Secondary objectives included documenting year-to-year variability in fish populations and stream habitat in geomorphically stable streams and demonstrating how reliably Habitat Suitability Index models can be used to characterize habitat conditions and predict the presence and abundance of populations of trout species. Fish and habitat databases were developed, and several important relations were identified. Fish-community indices differed considerably among sites where trout were present and where they were either absent or present in very low numbers; these differences were reflected in higher Habitat Suitability Index scores at trout-dominated sites. Several fish- community and habitat variables were found to be strongly associated with indices of stability and, therefore, determined to be useful tools for evaluating stream condition. Lastly, preliminary results suggest Rosgen stream type data can help refine fish and habitat relations and assist in our ability to predict habitat potential and fish-community composition.

Scientific Investigations Report

Effects of habitat characteristics and water quality on macroinvertebrate communities along the Neversink River in southeastern New York, 1991-2001

The Neversink River, in the Catskill Mountains of southeastern New York State, feeds the Neversink Reservoir, which diverts 85 percent of the river’s flow to New York City. Acidification of several headwater reaches has affected macroinvertebrate assemblages throughout the river system above the reservoir, and the alteration of flow conditions below the reservoir dam has affected macroinvertebrate assemblages for at least 10 kilometers downstream from the reservoir. In 1999, the U.S. Geological Survey, in cooperation with The Nature Conservancy, compiled data from 30 stream reaches to quantify the effects of acidification and of the reservoir on the structure and function of macroinvertebrate assemblages throughout the Neversink River. Acidic headwater reaches supported greater numbers of acid-tolerant chironomid taxa and fewer numbers of acid-sensitive Ephemeroptera and Trichoptera than neutral reaches, and fewer scraper individuals and more shredder individuals. The 14 reaches below the reservoir, with sharply decreased flows and altered flow patterns compared to reaches above the reservoir, supported more Chironomidae and fewer Ephemeroptera and Trichoptera than the upper reaches; they also had greater numbers of shredder individuals and fewer scraper and filterer individuals than reaches above the reservoir. Water-quality variables such as pH and aluminum concentration appear to have affected macroinvertebrate assemblages more strongly in the headwaters than below the reservoir, whereas physical-habitat variables such as mean channel width and water temperature have affected these assemblages more strongly downstream from the reservoir than in the headwaters. The water-quality changes due to acidification, combined with the decreased flows and lowered water temperatures below the reservoir, have disrupted downstream continuum of macroinvertebrate communities that would normally be observed from the headwaters to the mouth. The information presented herein provides a basis for further evaluation of the Neversink and similar river systems, and for assessment of the effectiveness of future conservation efforts.

New York

Relations of Environmental Factors with Mussel-Species Richness in the Neversink River, New York

INTRODUCTION Declines in the distribution, abundance, and diversity of freshwater-mussel species (family Unionidae1) have been reported worldwide (Bogan, 1993; Strayer and Jirka, 1997). The principal causes of the observed declines are difficult to confirm, however, because only a few of the many factors that affect mussel-species populations have been identified (Strayer and Ralley, 1993; Strayer, 1999; Baldigo and others, 2003; Strayer and others, 2006). The Neversink River, which drains the Catskill Mountains in southeastern New York (fig. 1), contains seven species of mussels (Strayer and Ralley, 1991; Strayer and Jirka, 1997). Populations of the endangered dwarf wedgemussel (Alasmidonta heterodon) and the threatened swollen wedgemussel (Alasmidonta varicosa) coexist with other unionid mussels in the Neversink River (Strayer and Ralley, 1991, 1993; Baldigo and others, 2003). Dwarf wedgemussel populations had previously been found only downstream from the site of an abandoned dam in the lower part of the river at Cuddebackville (fig. 1), and swollen wedgemussels were only found in the lower and middle reaches of the river. The limited distribution of these two species suggests that they may be susceptible to local extinctions. The distribution of mussel populations can be limited by impoundments. Mussel larvae develop in species-specific host fish; thus, impoundments that restrict passage of these host fish also restrict the extent of mussels. The Neversink River is impounded by the Neversink Reservoir [241 square kilometers (km2)], a major source of drinking water for the City of New York, and was also impounded 50 km downstream by the Cuddebackville Dam until 2004, when the latter was removed by The Nature Conservancy (TNC) and the U.S. Army Corps of Engineers to improve fish passage. The removal of this dam has provided previously unavailable habitat for diadromous and other fish species that act as hosts for rare mussel species. In addition, releases from the Neversink Reservoir that mimic the river?s original flow patterns have recently been proposed by TNC and could benefit the established mussel populations and aquatic communities. The ability to protect mussel populations and the potential to increase mussel richness in the Neversink River is unknown, however, because the environmental factors that affect the seven mussel species are poorly defined, and the distribution of mussel beds is patchy and thus difficult to quantify. In 1997, the U.S. Geological Survey, in cooperation with TNC, began a 6-year study along the Neversink River and its tributaries to (1) document the current distribution of each mussel species, (2) assess environmental factors in relation to mussel-species richness and distribution, and (3) identify the factors that most strongly affect mussel populations and develop an equation that relates environmental factors to mussel-species richness. This report (a) summarizes the methods used to quantify or qualify environmental factors and mussel-species distribution and abundance, (b) presents a list of environmental factors that were correlated with mussel-species richness, and (c) offers an empirical model to predict richness of mussel species in benthic communities throughout the basin.

Open-File Report

Regionalized equations for bankfull-discharge and channel characteristics of streams in New York State—Hydrologic Region 7 in western New York

Computation of bankfull discharge and channel dimensions (width, depth, and cross-sectional area) at ungaged sites requires equations that relate bankfull discharge and channel dimensions to drainage-area at gaged sites. Bankfull-channel information commonly is needed for watershed assessments, stream channel classification, and the design of stream-restoration projects. Such equations are most accurate if they are derived on the basis of data from streams within a region of uniform hydrologic, climatic, and physiographic conditions and applied only within that region. New York State contains eight hydrologic regions that were previously delineated on the basis of high-flow (flood) characteristics. This report presents drainage areas and associated bankfull characteristics (discharge and channel dimensions) for surveyed streams in western New York (Region 7). Stream-survey data and discharge records from seven active and three inactive USGS streamflow-gaging stations were used in regression analyses to relate drainage area to bankfull discharge and to bankfull channel width, depth, and cross-sectional area. The resulting equations are: (1) bankfull discharge, in cubic feet per second = 37.1*(drainage area, in square miles) 0.765 ; (2) bankfull channel width, in feet = 10.8*(drainage area, in square miles) 0.458 ; (3) bankfull channel depth, in feet = 1.47*(drainage area, in square miles) 0.199 ; and (4) bankfull channel cross-sectional area, in square feet = 15.9*(drainage area, in square mile) 0.656 . The coefficients of determination (R 2 ) for these four equations were 0.94, 0.89, 0.52, and 0.96, respectively. The high coefficients of determination for three of these equations (discharge, width, and cross-sectional area) indicate that much of the range in the variables was explained by the drainage area. The low coefficient of determination for the equation relating bankfull depth to drainage area, however, suggests that other factors also affected water depth. Recurrence intervals for the estimated bankfull discharge of each stream ranged from 1.05 to 3.60 years; the mean recurrence interval was 2.13 years. The 10 surveyed streams were classified by Rosgen stream type; most were C- and E-type, with occasional B- and F-type cross sections. The equation (curve) for bankfull discharge for Region 7 was compared with those previously developed for four other hydrologic regions in New York State. The differences confirm that the hydraulic geometry of streams is affected by local climatic and physiographic conditions.

Scientific Investigations Report

Regionalized equations for bankfull-discharge and channel characteristics of streams in New York State—Hydrologic Region 5 in central New York

Equations that relate drainage area to bankfull discharge and channel dimensions (width, depth, and cross-sectional area) at gaged sites are needed to define bankfull discharge and channel dimensions at ungaged sites and to provide information for the design of stream-restoration projects. Such equations are most accurate if derived from streams within an area of uniform hydrologic, climatic, and physiographic conditions and applied only within that region. A study to develop equations to predict bankfull data for ungaged streams in New York established eight regions that coincided with previously defined hydrologic regions. This report presents drainage areas and bankfull characteristics (discharge and channel dimensions) for streams in central New York (Region 5) selected for this pilot study. Stream-survey data and discharge records from seven active (currently gaged) sites and nine inactive (discontinued gaged) sites were used in regression analyses to relate size of drainage area to bankfull discharge and bankfull channel width, depth, and cross-sectional area. The resulting equations are: (1) bankfull discharge, in cubic feet per second = 45.3*(drainage area, in square miles) 0.856 ; (2) bankfull channel width, in feet = 13.5*(drainage area, in square miles) 0.449 ; (3) bankfull channel depth, in feet = 0.801*(drainage area, in square miles) 0.373 ; and (4) bankfull channel cross-sectional area, in square feet = 10.8*(drainage area, in square miles) 0.823 . The high correlation coefficients (R 2 ) for these four equations (0.96, 0.92, 0.91, 0.98, respectively) indicate that much of the variation in the variables is explained by the size of the drainage area. Recurrence intervals for the estimated bankfull discharge of each stream ranged from 1.11 to 3.40 years; the mean recurrence interval was 1.51 years. The 16 surveyed streams were classified by Rosgen stream type; most were mainly C-type reaches, with occasional B- and F-type reaches. The Region 5 equation was compared with equations developed for six other large areas in the Northeast. The major differences among results indicate a need to refine equations so they can be applied by water-resources managers to local planning and design efforts.

Scientific Investigations Report

Regionalized equations for bankfull-discharge and channel characteristics of streams in New York State—Hydrologic Region 6 in the Southern Tier of New York

Equations that relate bankfull discharge and channel characteristics (width, depth, and cross-sectional area) to drainage-area size at gaged sites are needed to define bankfull discharge and channel dimensions at ungaged sites and to provide information for watershed assessments, stream-channel classification, and the design of stream-restoration projects. Such equations are most accurate if derived from streams within an area of uniform hydrologic, climatic, and physiographic conditions and applied only within that region. In New York State, eight hydrologic regions were previously defined on the basis of similar high-flow (flood) characteristics. This report presents drainage areas and associated bankfull characteristics (discharge and channel dimensions) for surveyed streams in southwestern New York (Region 6). Stream-survey data and discharge records from 11 active (currently gaged) sites and 3 inactive (discontinued) sites were used in regression analyses to relate bankfull discharge and bankfull channel width, depth, and cross-sectional area to the size of the drainage area. The resulting equations are: (1) bankfull discharge, in cubic feet per second = 48.0*(drainage area, in square miles) 0.842 ; (2) bankfull channel width, in feet = 16.9*(drainage area, in square miles) 0.419 ; (3) bankfull channel depth, in feet = 1.04*(drainage area, in square miles) 0.244 ; and (4) bankfull channel cross-sectional area, in square feet = 17.6*(drainage area, in square miles) 0.662 . The coefficient of determination (R 2 ) for these four equations were 0.90, 0.79, 0.64, and 0.89, respectively. The high correlation coefficients for bankfull discharge and cross-sectional area indicate that much of the variation in these variables is explained by the size of the drainage area. The smaller correlation coefficients for bankfull channel width and depth indicate that other factors also affect these relations. Recurrence intervals for the estimated bankfull discharge of each stream ranged from 1.01 to 2.35 years; the mean recurrence interval was 1.54 years. The 14 surveyed streams were classified by Rosgen stream type; most were C-type reaches, with occasional B-type reaches. The Region 6 equation (curve) for bankfull discharge was compared with equations previously developed for four other large areas in New York State and southeastern Pennsylvania. The differences among results indicate that, although the equations need to be refined by region before being applied by water-resources managers to local planning and design efforts, similar regions have similar relations between bankfull discharge and channel characteristics.

Scientific Investigations Report